Desulfosarcina variabilis: Dvar_04980
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Entry
Dvar_04980 CDS
T10869
Name
(GenBank) CbiO1: cobalt import ABC-binding protein
KO
K02006
cobalt/nickel transport system ATP-binding protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dvar_04980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_04980
Transporters [BR:
dvr02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalt transporter
Dvar_04980
Nickel transporter
Dvar_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
SbcC_Walker_B
RsgA_GTPase
AAA_22
AAA
nSTAND6
AAA_29
MMR_HSR1
AAA_16
MeaB
nSTAND1
AAA_5
AAA_15
AAA_23
Rad17
AAA_14
RNA_helicase
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
XPS82480
LinkDB
All DBs
Position
complement(546171..546845)
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AA seq
224 aa
AA seq
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MIDLKDICFSYPGRGRVLNNLNFCLGKEQRLGLIGPNGCGKSTLMHLLMGLNKPESGTIR
ILGKTMHGETDFRKARRQLGFVFQNADDQLFSPTVIEDVAFGLLNMGKSPQEAVALSRKM
LESLNLSGFENRITYQLSGGEKKLVSLATVLVMEPQVLLLDEPTTGLDERTVERIIRVLN
DLDIAYVVVSHEFDFLARTTTDIYAMKNGQIEYRCGSDQFRAAS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttgattgacctcaaggacatctgtttttcctatccgggccggggacgcgtcctgaacaat
ttgaacttttgcctgggcaaagaacagcgattgggcctgatcggccccaacggctgcggc
aaatccaccctcatgcatctgctcatggggctgaacaaacccgaatccggcacgattcga
attctcggcaaaaccatgcatggagaaacagattttagaaaggcccggcggcaactgggc
tttgtgtttcaaaatgccgatgatcagctattttcccccaccgtgatcgaggatgtggcc
tttggtctgctcaacatgggtaaatctccgcaagaagcagtggcactgtcccggaaaatg
cttgagtccctcaatctaagcggattcgaaaaccggatcacctaccaattgtccggaggg
gagaagaaactggtgtccctggccacggtactggtcatggagccccaggtcctgctgctg
gacgaaccaaccaccggcctggacgagcggaccgttgagcgaatcatccgggtgctcaac
gatcttgatatcgcctatgtggtggtctcccacgaatttgattttctggcgcggaccaca
acggatatctacgccatgaaaaacggacagatcgaatatagatgcggttctgatcagttt
cgggccgcatcctaa
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