Desulfosarcina variabilis: Dvar_05500
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Entry
Dvar_05500 CDS
T10869
Name
(GenBank) conserved uncharacterized protein, DUF2219
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00540
Lipopolysaccharide biosynthesis
dvr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Dvar_05500
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dvr01005
]
Dvar_05500
Lipopolysaccharide biosynthesis proteins [BR:
dvr01005
]
Lipid A
Dvar_05500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
XPS82532
LinkDB
All DBs
Position
607218..608306
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AA seq
362 aa
AA seq
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MKILTISLVAFFLIQPAQVLFADDFYLDSERNSRTLRFEIDNDIVWNDDSGFTNGWSLQY
HSHRSARWEDTNTVEPVKWVGRHFPTLNDENAIVRISHGIGQNMITPGEIQAEIPQDGDL
PYAGTLTYTLGWQNFNRQKASNFQISVGVLGPESFAEQFQKFMHNDLGFGEPPNGWDTQR
DTEPILNLGYQYAYCLARIGRYENGWAGQLAVAPSASLGNLFTAAELILAVRFGWNMLEG
FNTYAAPPGRGFFHAAYLPKPTSASPHAIEFVLGGRGTGLAYSVIYDGSLITEDDRDVDR
RGFFLTAGFGIYYHYYDYLSIRATIQKSSDLLKTDAIPDPVPGRNKTDEDVSFGSLIIDF
HF
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcttaacgatctcacttgtcgcgttttttttgattcagccagcccaagtcctc
tttgctgatgatttttatctggatagtgaacgcaacagccgaaccctgcgctttgagatt
gacaatgatattgtctggaacgatgacagtggattcaccaatgggtggagccttcagtat
cattcacatcgttcagcccgttgggaggacaccaatacggtcgagccggtaaaatgggtg
gggcgccattttccaacgctcaacgatgaaaatgccattgtccgcatcagtcacgggatc
ggtcaaaatatgattacccccggagaaatccaagcggaaatcccccaagatggtgatctg
ccctatgccggtaccctgacgtatacgcttggctggcagaactttaaccggcagaaagcc
tcgaattttcagatctctgtcggtgttctcggaccggagtcctttgccgagcaatttcaa
aagttcatgcacaatgatctgggttttggtgagccccccaatggatgggatacgcaacgc
gacacagaaccgatcctgaatttaggctatcagtatgcctattgtctggcgagaatcggc
cgatatgagaacggctgggcgggacagctggccgtggcgccgagcgcctctttaggaaat
cttttcaccgcggctgagcttattttggcggtgcggttcgggtggaatatgctcgagggg
ttcaatacctatgccgccccgcccggtcgcgggtttttccatgccgcctatcttcccaaa
cccacatcggcatccccccatgccatagaattcgtattgggggggcggggcacgggcctg
gcctattcggtcatttacgatggcagtctgataaccgaggacgatagagatgtggaccgg
aggggattcttcttaacggctggtttcggtatctactatcattattacgattatctgtct
atcagagcgaccatccagaaatcctccgatcttcttaaaacggacgccattccggatcct
gtgccgggtagaaacaagactgacgaggatgtctcatttgggtctttgatcatcgatttt
catttctaa
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