Desulfosarcina variabilis: Dvar_05680
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Entry
Dvar_05680 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_05680
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_05680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XPS82550
LinkDB
All DBs
Position
623577..625607
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AA seq
676 aa
AA seq
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MTKSASDRTLDIIGKGLMMLFTTFSLLFYLSRLGMAQTQDLTEMSIEELMNIQVTSVSKK
AQHLSDSAAAIFVITNDDLRKSGVTSIADALRMVPGLNVTRIDSNKWAINSRSSTSRFSD
KLLVLMDGRSVYTHYFSGVYWEVQDIMLQDIKRIEVIRGPGATLWGANAVNGVINIITKS
AADTQGAFMSAGGGSIEKVFAEARYGGRIGTDSYYRVYAKGFERGEFEFIDGEDAGDEWG
MRQGGFRFDSRLNASDGLTVQGDVYDGDIDQKLYLPTTTPPFISTVDDETDVSGGNLLGR
WQRTFSSTSDLTLMAYYDRSRRKEAWTDQERDSFDLDIQHHFRMGERNNIIWGARYYWTN
DEFGNTSIITLDPTTRTDELFSVFLQDEITLYRDRLWLTLGSKFEHNDYTGFEMQPSGRL
FWAAADEHKLWAAVSRAVRTPSRIESDSTLVNDVVPPSSSSPLPIALTLVGNENFEAEAL
IAYELGYRFLPDPVFSLDLALFYNDYDNHRSAETGTPTFQGTYIKQPVNLGNNYSTHTYG
GEAAVGWQARNWLKLDLAYSYLECNFEDSNQLGRAPRHQISLRSAVKLHADVDLDVWLRY
MDDATTVNVDDADYFYAIDDYLTLDLRLAWRPIPSLELSIVGQNLLDSNHLEFVQEAYSR
PTDVPRSVYAKISYGF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatcagcatccgataggactctcgatatcatcggcaaaggcttgatgatgttg
tttaccacattcagtttgctattttatctatcccggctggggatggctcaaacccaggat
ctaaccgagatgagcatcgaggagttgatgaacatccaggtgacctcggtcagcaaaaaa
gcccagcatctgtccgacagtgccgcagccatttttgtcatcaccaatgatgatctgcgt
aaatccggggtgaccagcatagccgatgcgttgcgaatggtgccgggactcaacgtaacc
cgtatcgattcgaataaatgggcgatcaacagccggagttcaacgagtcgattttccgac
aagctgttggtgttgatggatggccgcagtgtctacacccactatttttcgggtgtgtat
tgggaagtccaggatatcatgctgcaggatatcaagcggatcgaagtcattcgtggaccg
ggggcaaccctgtggggggccaatgcggtcaacggcgtcatcaacatcattaccaaatcg
gcggcagatacccaaggtgcgttcatgtcggccggtggcggcagcattgaaaaagtcttt
gccgaggcacgctatggtgggcgaatcggaaccgattcctactatcgggtatatgccaaa
ggctttgaacgcggtgaatttgaattcatcgacggtgaagacgccggtgatgaatggggc
atgcggcagggcggatttcggttcgattccaggctaaatgccagcgatggcctgacggta
cagggagacgtctacgatggggatatcgaccagaagttatacctgcccacaacaacccct
ccttttatatcgactgtggacgatgaaacggatgtgtccggcggtaacctgctgggtcga
tggcagcggacattctcatctacctccgatctaacccttatggcctattatgaccgcagc
cggcgtaaggaggcgtggaccgatcaggagcgggattcattcgaccttgacattcagcat
cacttcaggatgggtgagcggaacaacatcatctggggcgcacgttattattggaccaat
gacgaattcggcaatacctcgatcattacccttgatccaacgacgcggaccgacgagctg
ttcagcgttttcctgcaggatgaaattaccctttacagggaccgcctgtggctgacactg
gggtccaagtttgagcataacgattacaccggctttgagatgcagcccagcggtcgcctg
ttttgggctgctgccgatgaacacaaactatgggctgctgtatcgcgtgccgtacggacg
ccgtcacgcatagaaagtgattcaacgttggtcaatgatgttgtaccgccttccagcagt
tcgcctttacccatcgccttgacactggtcggcaatgaaaatttcgaggcggaagcgttg
attgcctatgaactcggatatcgattcttgcccgatccggtattttccctggacctggcc
ctgttttacaatgactatgacaaccatcgatccgccgagacaggcaccccgacattccaa
gggacatatatcaaacaacccgtgaatctcggtaataactattccacccacacgtatggc
ggtgaagcagccgtgggatggcaggcgcgcaactggctgaagctggacctggcctacagc
tatctggaatgcaattttgaggactcgaatcaattgggtcgggcgcccagacaccagatt
tcccttcgctcggcggtaaagctccacgccgatgtcgatctggacgtgtggctgcgttac
atggatgatgcgaccacggtcaacgtggacgatgcggattatttctacgccatcgatgat
tatctgaccctcgacctcaggctggcctggcggcccataccatcgcttgaactgtctatt
gtgggacagaatttactcgacagcaaccacctggaattcgttcaggaggcctattcgagg
cctactgacgtgccccgcagtgtttacgcaaaaatttcttacggattttaa
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