Desulfosarcina variabilis: Dvar_06110
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Entry
Dvar_06110 CDS
T10869
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00920
Sulfur metabolism
dvr01100
Metabolic pathways
dvr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Dvar_06110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_06110
Enzymes [BR:
dvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Dvar_06110
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Dvar_06110
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Dvar_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XPS82593
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All DBs
Position
669834..670826
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AA seq
330 aa
AA seq
DB search
MMKKIIQQLAKSEHVLLASHIKPDGDAIGALLAMGIALEKQGCQVVLFNESSIPEVYRFL
PAVGRIQKKLTDWQRFDTAVILDCGVLSRVGSAADDIATIPVIINIDHHTTNNRFGHFHL
VDVNACATAEIVYRLILEMKLDVDVAMATAIYTGILTDTGSFRFSNTNQAAFSICEAMVA
AGVKPSTVAQHVYGAYSLGRIKLLNLALDSIEISNNGYLSIMTVTREMLACTDTQPEDAD
GLINYARRIRDVKVAALIHELENNTAPPPRKQYHVSLRSDGSVDVSNIAMKFGGGGHAGA
AGFSVESSLVELKQTIYDLSDGFGESCHLN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaataatccaacagctggcgaaaagtgaacacgtccttctggcatcgcat
ataaagccggacggggatgccatcggtgcactgctggccatggggatcgcattggaaaag
caggggtgccaagtggtgctctttaacgagagttccatcccggaggtatatcgatttttg
cctgccgtggggcgcatccaaaaaaaattgaccgactggcagcggtttgataccgcggtt
atactggattgcggtgttctcagtcgggtgggatcggccgcggatgatattgccaccata
ccggtgatcatcaatatcgaccaccataccaccaataatcgctttgggcatttccatctg
gtggatgtgaacgcctgtgcgacggctgaaattgtctaccggctgattctggaaatgaag
ctcgatgtggatgtggccatggcaacggcgatctataccggcatcctgaccgataccgga
tcttttcgtttttccaatacgaatcaggccgctttttccatttgcgaagccatggtggcg
gcaggtgtgaaaccatccacagtggctcaacatgtttatggtgcatactccttgggacga
atcaaattgctcaatctagcactcgattccatcgaaatatccaataacggctatttgtcg
attatgacggtgacccgggagatgttggcgtgcacggatacccagccagaagacgcggac
ggcctgatcaactatgcgcggcgaattcgtgatgtgaaagttgctgcgttgattcatgag
ttggaaaacaataccgcaccacctccccgaaagcagtaccatgtgagtttgcggtcggat
ggtagcgtggacgtttctaatatcgccatgaaatttggtgggggagggcatgccggcgca
gccggtttttccgtggaatcgagtctggtggaattaaagcagacgatttatgatttatct
gatggttttggcgagtcatgccatctgaattaa
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