Desulfosarcina variabilis: Dvar_06120
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Entry
Dvar_06120 CDS
T10869
Name
(GenBank) TruB: tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvr03016
]
Dvar_06120
Enzymes [BR:
dvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dvar_06120
Transfer RNA biogenesis [BR:
dvr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dvar_06120
Prokaryotic type
Dvar_06120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XPS82594
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All DBs
Position
670811..671722
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AA seq
303 aa
AA seq
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MPSELSGIVVVDKPEGISSAGIVARVKKLSNARKVGHAGTLDPLATGVLICCLNRATRLS
QFLLKGDKTYAADLVLGTVTDTQDATGTIVEQHSWADVTEDGIRTVAAGFLGKITQIPPV
YSALKHKGTPLYKLARRGKAVEKPGRSVWIKRLEILAIDLPVVRFVVCCSSGTYVRTLCA
DIGRALGCGGHLKRLRRTASSGFSVQDAWQLDQLAQLRETGRLAQAVIPMNAALPFMPAV
VADKDLANKIKHGMPLVVADFDNPLQEADQGVFKVVDEKGCLIAVLGESQTPGGYNYCCV
FSA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgaattaagcgggattgttgttgtcgataaaccggagggcatctcgtcagcc
gggattgtagcccgggttaaaaaactgtccaatgccaggaaggttgggcatgcggggacg
ttggatccccttgcgaccggtgtattgatttgttgcctgaatcgtgctacgcggctttct
cagtttttgctaaagggtgataaaacctatgcagccgatttggttctgggcacggtaacc
gatacccaggatgccaccggaaccattgtcgaacagcattcgtgggcagatgtcaccgag
gacggcattcgcacggtagccgcaggatttttgggcaagatcactcaaatcccacccgtt
tattcggcgttgaaacataaggggacgccgctatacaaattggcccgccgaggaaaagcg
gtggaaaaaccaggccggtcggtttggatcaagcgattggaaattcttgccattgatctg
ccggtggtacggtttgtggtatgctgctcatccggtacttacgttcgcaccctttgtgct
gacattggcagggccttggggtgtggcgggcacttgaagcgattgcgcagaaccgctagc
agtgggttcagcgtccaggatgcctggcagctggaccagctggcccaactgcgggaaacg
ggccgacttgcccaagccgtgattcccatgaatgcggcattgccattcatgccggcggtt
gtggcggataaagatctggccaataaaataaaacacggcatgccgttggtcgtggccgac
tttgataatccgctgcaagaagcggatcaaggcgtatttaaggtcgtcgatgaaaaaggc
tgcttgattgccgtgctgggtgagtcccagacgccgggtggctataattattgttgtgtt
ttttcagcataa
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