Desulfosarcina variabilis: Dvar_07990
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Entry
Dvar_07990 CDS
T10869
Name
(GenBank) MvaB: hydroxymehtylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00280
Valine, leucine and isoleucine degradation
dvr00650
Butanoate metabolism
dvr00907
Pinene, camphor and geraniol degradation
dvr01100
Metabolic pathways
dvr01120
Microbial metabolism in diverse environments
dvr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Dvar_07990
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Dvar_07990
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Dvar_07990
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dvar_07990
Enzymes [BR:
dvr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Dvar_07990
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
XPS82781
LinkDB
All DBs
Position
complement(917781..918719)
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AA seq
312 aa
AA seq
DB search
MQIVEVGPRDGLQNETAPIPTAAKITFINALSVSGVGEIEVSAFVSPRWVPQLSDATEVL
AGITRQPGVVYSVLVPNRQGLEQALAARVDKVSVFTAASETFNRKNINTTIEGSIRRFQP
VVAQARDAGLPVRGYVSTAFWCAFEGKIEPQAVLDVVDRLVDIGIDEVAISDTIGKATPD
EVKRLLDLLAGRLPVSRIAGHFHDTYGRGVDNVLAAWSAGIRTIDASVGGLGGCPYAPGA
SGNVATDDVVAALEKQGIATGVDRQRLAEAFDILRPFRVDDRRTLPADGSPACAACQFST
GKVCCKRYQAGN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgttgaggtcggcccacgcgatgggctgcaaaatgaaaccgcaccgattccc
acggcagctaagattaccttcatcaatgccctttccgtaagcggtgtgggagaaattgag
gtaagcgcctttgtgtcgccgcgttgggtaccccaactgagcgacgctaccgaggtacta
gcgggtatcacccgccaaccgggtgtggtctactcggtcctggtgcccaaccggcaaggg
ctggagcaggccctggccgcacgggtagacaaggtgtcggtattcacggccgccagcgaa
accttcaaccgcaaaaatatcaacaccaccattgaaggatccatccggcgtttccaacca
gtggtagcgcaggcccgcgatgccggcctgcccgtacgtggctacgtgtccaccgccttc
tggtgcgcgtttgaaggcaagattgaaccacaggccgtgcttgacgtggtggaccgtctg
gtggacatcggcattgacgaagtggctatttcagacaccatcggcaaagccaccccggat
gaagtcaagcgccttctggatctgctcgcaggccgcctgccggtatcgcgcattgcaggg
cactttcacgacacctacggccggggcgtggacaatgttctggctgcctggtcggccggt
atccgaaccattgacgccagtgtgggcggcctgggcggttgcccctacgccccgggcgcc
agcggtaatgtggccaccgacgatgtggtggccgccctggaaaaacagggtatcgccacc
ggtgttgaccggcagcggctggccgaggcctttgatattttacgtccctttcgagtcgat
gatcgccgcaccctgcccgcggacgggtctccggcctgcgctgcctgccagttctccacc
ggcaaggtctgctgcaagcgctatcaggctggcaattaa
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