Desulfosarcina variabilis: Dvar_09140
Help
Entry
Dvar_09140 CDS
T10869
Name
(GenBank) sigma54-dependent transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dvr03000
]
Dvar_09140
Transcription factors [BR:
dvr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dvar_09140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
Mg_chelatase
HTH_8
AAA
AAA_2
GAF_3
AAA_16
HTH_30
MCM
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XPS82896
LinkDB
All DBs
Position
complement(1035706..1037259)
Genome browser
AA seq
517 aa
AA seq
DB search
MDMIEPLVSIAVDLTAAMSAKDRYERLLSAMAKFLPYDAAALMRVDGDLLVPVAARGLIP
DAMGRQFARSTHPRLDIICNSDEPVRFPADNTLPDPFDGLLSADAGALSHIHACLGCPLR
VNNALIGVLTADAFDPKAFDDMDPRFLKAMGALAGAQMQTANLIDALEKSAERQGQIASD
LMQDIHLRQGTQILGGSSVMEHLRREIDLVARSDFTVLVLGETGVGKELVVRAIHAASNR
KEAPLLYLNCAALPETLAESEMFGHTRGSFTGASRDRAGKFELANEGTLFLDEIGELPLS
VQPKLLRAIQEGEIQRVGSDMTSRVDVRLLAATNRNLEQEVESKRFRADLFHRLNVYPLN
VPALRMRKEDIPLLAGHFCERIQRRLGLGPVRINPDSYETMTQYDWPGNVRELENVISRA
VLKASFDVTRGDPVVIYPSHLGGDFVPAHLSERPQPPEEKTVFTKDFSFNDAVRALKIRM
IQKAIDKNNGNWAAAARDLNMHRSNLHNLAKRLGLKN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggatatgatcgaaccattggtttccattgctgtcgatctcacagcagcgatgagcgca
aaggaccgctacgaaaggctgctcagtgctatggcaaagttccttccctatgacgctgcg
gcactgatgcgggtggatggggacttgttggttccggtcgccgcccgtggacttattccg
gacgccatgggcaggcaatttgcgaggagcacgcacccaagattagacatcatctgcaat
tctgatgaaccggtgcggtttccggcagacaacacgctccctgacccattcgatggtctg
ctgtctgcggatgccggtgcattgagccatatccacgcgtgcctgggctgcccgctacgt
gtgaacaatgcactcattggtgtgctcaccgctgatgcattcgatcccaaggcattcgac
gacatggatccccgctttttgaaagccatgggcgcgttggccggggcacaaatgcaaacg
gccaacctgatcgatgctttggagaaaagtgccgaacgacagggtcagattgccagtgat
ttgatgcaggacattcatttgcgccaggggacgcaaattctcggcggcagctccgtaatg
gaacatttgcgtcgggagatcgatctggtggcccgttccgattttaccgttttggtcttg
ggggaaacgggtgtcggcaaagaattggtcgtcagggccattcatgcggcttcgaatcgg
aaagaggctcccctgttatatttgaattgtgccgccttgccggagacgcttgccgagagc
gaaatgttcggccataccagaggttcttttaccggtgcgagtagagatcgtgcaggaaaa
ttcgaactggccaacgagggcacgctttttctcgatgagattggagagttgccgctatcg
gttcaacccaaactgttgcgggccatccaggaaggtgaaattcagcgcgttggatcggat
atgacatcgagggtcgatgtgcgactgcttgccgccacgaatcgaaatcttgaacaggag
gtcgaaagcaaacgcttcagggcggatctttttcaccgattgaacgtttaccccctaaac
gtcccagcactaaggatgcgtaaagaggatatccccctgctggccgggcatttctgcgaa
cgcatccagcgtcgtttgggattggggcctgtcaggataaaccccgattcatatgaaacg
atgacgcaatatgattggccgggaaacgtaagagaactggaaaatgttatttcccgggcc
gtgttgaaagcttccttcgacgttaccagaggggatccggtggtcatctatccatcccat
ttgggcggcgattttgtcccggcgcatctttcggaaaggccgcaaccacctgaagaaaaa
actgtttttacgaaggatttttcattcaacgatgcggttagggcgcttaaaataaggatg
attcaaaaagccatcgacaagaacaatggcaactgggccgcagcggcaagagatttgaac
atgcatcgcagtaatcttcacaatcttgccaaaaggcttggattaaaaaattag
DBGET
integrated database retrieval system
