Desulfosarcina variabilis: Dvar_09660
Help
Entry
Dvar_09660 CDS
T10869
Name
(GenBank) SpoIID/LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dvr01011
]
Dvar_09660
Enzymes [BR:
dvr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Dvar_09660
Peptidoglycan biosynthesis and degradation proteins [BR:
dvr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Dvar_09660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
TPR_2
TPR_6
TPR_12
TPR_19
TPR_16
Motif
Other DBs
NCBI-ProteinID:
XPS82948
LinkDB
All DBs
Position
1096307..1097932
Genome browser
AA seq
541 aa
AA seq
DB search
MRRFLLLFGLPIAILFFTISTYADMSAETLEKEHLARYCINYASYLIDVGKYLEALENLE
TAAETTGVAKTRTDALLSKATLLASFLDAPEQALKVYQDLAQGDDPAAEIAAYREGFLLF
DLQRFEKARASLARYRKRFPEGRFRFQAEALENEIARQTPPSPPTPPTPTPTPTPTPTPT
PTPPPTPAPTPPPVEKPEPPMLRVRVAYTTKDAQITGSTLVCAKGVGCKQRFTLRVKGGQ
LLVNGVNAPTVPLVFKSEQPLTIITNKKEKKLRGHLVASIRSGKLLVNNVVDIEDYLLSV
VPSENPASWPIETLKAQAVAARTYAYYQLLHRKTWAYDLVDYAGDQAYGGMAKEHSRSTK
AVNATQGVVLTFNDKPILAMFSANSGGYTADAKAVFDLSKPYLVAREDPASLHGSMAQWT
RKFSVTQVVSALAKINIKADGLTAIEAAQRGPSGRIIKVRLVFANGKHKVLRNRPTLRRA
LDLPEILHDIDKEGDTFIFHGHGWGHGIGYSQWGSAHMGKEKNYREILAFYYGDVKQDKL
W
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcttcctcctgctttttggattgccgattgcaatccttttttttaccatctcc
acgtatgccgacatgtccgccgagaccttggaaaaggagcacttggccagatattgcatc
aactacgccagttacctgatcgatgtgggcaagtatcttgaggcactggaaaacctcgaa
accgccgccgaaaccaccggggtagccaaaaccagaactgacgcgttgctgtccaaggcc
acgctgctggcctcttttctggatgctccggagcaggcgttgaaggtttaccaggatctt
gcccaaggagatgatccggcagctgaaattgccgcttatcgggaaggatttttgcttttt
gaccttcaacgtttcgaaaaggcacgtgccagccttgcccgataccgcaaacgatttccc
gagggacggtttcgatttcaggccgaagcgcttgaaaacgagatcgccaggcaaacgccg
ccttcccccccgacgccgcccacacccacacccacacccacacccacacccactccaaca
ccgaccccgccacctacacctgcacccacaccaccgcctgttgaaaaaccggagccgccg
atgctgcgtgtgcgtgtggcctacaccacgaaggatgcgcaaatcacgggtagtaccttg
gtttgtgccaaaggcgtggggtgcaagcagcgttttacattgcgggtcaaaggggggcaa
ttgctggtcaacggggtgaatgcacccacggttccattggtcttcaagagtgaacagccc
cttacgattatcaccaataaaaaagagaaaaagctgcgcggacatttggtggccagcatt
cgaagtggcaaattgctggtcaacaatgtggttgatatcgaagattatctgctcagtgtg
gtaccatcggaaaatccagcctcatggcccattgaaacgctcaaggcccaagccgtggct
gcccgaacctatgcgtattatcaactgttgcatcgcaagacgtgggcctacgatctagtg
gattatgccggtgaccaggcttatggtgggatggccaaagaacattcgcgcagcaccaag
gcggtcaacgccacccaaggcgtggtgttgacctttaatgataaacccatcctggccatg
ttcagtgccaacagtggcggctataccgccgatgccaaagcggtttttgatctgtccaaa
ccttacctggttgcccgggaagatccggcaagtctgcatggcagcatggcccagtggacg
cgtaagttcagtgtcactcaggtggtcagtgccctggcaaagataaacatcaaagccgac
gggctgactgccatcgaagccgcccaaagggggccatcggggcgcatcatcaaggtccgt
ctggtttttgccaatgggaaacacaaggtactacgcaatcgtcccaccttgcgccgggcg
ctcgacctgcctgagattctacatgacattgacaaagaaggtgatacctttatatttcat
ggtcatgggtggggccatggcatcgggtattcccaatggggcagtgcccacatgggcaaa
gagaaaaattaccgggagatcctggcgttttactatggtgatgtcaagcaggataaactg
tggtga
DBGET
integrated database retrieval system
