Desulfosarcina variabilis: Dvar_10620
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Entry
Dvar_10620 CDS
T10869
Name
(GenBank) NikA1: Nickel ABC transporter, Nickel-binding periplasmic protein
KO
K15584
nickel transport system substrate-binding protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dvar_10620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_10620
Transporters [BR:
dvr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Nickel transporter
Dvar_10620
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XPS83044
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Position
1201751..1203340
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AA seq
529 aa
AA seq
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MPERKPFWGNRCVLIALMIIFMLTAASASAKPEILTYSWPGNVGPLNPHLYSPNQMFAQA
MVYEPLVRYMGKGKVAPWLAESWDISSDQLTYTFHLRKNVVFSDGTPFDARAVKLNFDAI
LANAERHAWLGLISLIQGIQVVDDYTIAVVLKEPYYAILQDLTLVRPFRFLSPKAFPAGG
NTAKGLTAAIGTGPWKLVESKLGEHDFFERNEKYWGRQPLLQGIDVKVISDPNTRAVALE
TGEIDLIYGDDQISPDLFQRFRGNPAFTSGRSAPLATRAVAVNSNRGATKEIEVRQAILH
AVNKDAIIKGIFWETEEKADTLLHPDNPYCDLALPPYSYNPQKANAILDRAGWKRPTNSQ
YRSKNGQRLIVEFLYVGNHSIEKSMAEVIQSDLLKIGIQVQLKGLEEDMFINEQKTGGFH
LTFNNTWGPPYEPHAYLGSMRKPSHADYQAQAGLTMKSDIDDAISKVLKSVDEERRIELY
RYILNTLHDQAIYLPISYACGVFIHGSGLKNVTYGTTKNEIPFETISKP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgaaagcctttttggggaaacagatgtgtgctgattgctttgatgatcatt
tttatgctcacagcagcgtcagcttctgcaaaaccggaaatattaacttattcctggcct
ggtaatgtcggcccgctgaacccgcatctttactcaccgaaccagatgtttgcccaggcc
atggtttatgagccgctggttcgttatatggggaagggaaaagtagcgccgtggttggcc
gagtcctgggatatttcttctgatcagctcacatatacgtttcatctgagaaagaacgtt
gtcttttccgacggtacgccttttgatgcacgggcggtcaaactcaattttgatgcgatt
cttgcaaatgccgagcgacatgcctggttggggctgatttctttgatccaaggtatccag
gtggttgatgattatacgattgccgtagtactgaaggaaccgtactatgccatactccag
gatttaacgctggtccggcctttccgtttcctgtctccgaaggctttccctgccggtgga
aatactgccaagggattgacggctgcgattggaacgggtccatggaaactggtcgagtca
aagctgggagagcatgacttttttgagcgaaacgagaagtactggggacgacagccgctg
ctgcaaggcatcgatgttaaggtaatttccgatcccaatactcgcgccgtagctttggag
accggtgagattgatctgatttatggagatgatcagatcagtccggatctgtttcaacgg
tttcgtggcaacccggcctttacgtcagggcgctcagccccgttggcgacacgagcggtg
gctgtaaacagcaaccgcggcgcaacaaaggaaatcgaggttcgccaggcaattttgcat
gccgtcaacaaggatgccatcatcaaaggcattttttgggaaacggaagaaaaagcggat
acattgcttcatcctgacaatccatactgtgatttggccctgccaccgtattcatacaac
ccgcaaaaggcaaatgcgattcttgatcgggccggctggaaacgtccgaccaacagccag
tatcggagtaaaaatgggcaaaggctgattgtggaattcctttatgtcggcaatcattcc
atcgaaaaatccatggccgaggtgattcaatccgatctgttgaagatcggaatccaggtg
cagttgaagggacttgaagaggatatgtttattaatgagcaaaaaacgggtggctttcat
ttaacgttcaataacacttggggacctccttatgaacctcatgcgtacttgggttccatg
cgtaagccttcccatgccgattaccaggctcaagcaggtttaacaatgaaaagcgatatc
gatgatgcaatctccaaagtactcaaatctgtggatgaagagcgcagaatcgaactttat
cgatatattttaaacacgcttcacgatcaggcgatttacctgccgataagctatgcttgc
ggggtttttattcatggctcagggctaaagaatgttacctatggaaccactaaaaatgag
atcccgtttgagaccataagcaaaccttaa
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