Desulfosarcina variabilis: Dvar_11270
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Entry
Dvar_11270 CDS
T10869
Name
(GenBank) CMP/dCMP deaminase zinc-binding
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00240
Pyrimidine metabolism
dvr01100
Metabolic pathways
dvr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Dvar_11270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dvr02044
]
Dvar_11270
Enzymes [BR:
dvr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
Dvar_11270
Secretion system [BR:
dvr02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
Dvar_11270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
APOBEC_N
Bd3614-deam
APOBEC4_like
SNAD4
Motif
Other DBs
NCBI-ProteinID:
XPS83109
LinkDB
All DBs
Position
complement(1283695..1284204)
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AA seq
169 aa
AA seq
DB search
MKPAASGKRSDYLSWDDYFMAVALLSAKRSKDPNTQVGACIVNRQKRIVGVGYNGFPTGC
SDDTLPWCREGDFLDTKYPYVCHAELNAVLNSVPGNLTNCILYTALFPCNECAKVIIQAG
IQEVVYLSNKYVDTDSVRAARTMFDQAGVACRQLSPSTSMVTITLTEGA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagcagcaagcggtaaacgatcagattatctctcctgggacgactatttcatg
gccgtggcccttctgtcggctaagcgcagcaaggatcccaacacccaggtcggggcctgc
atcgtcaaccgccagaagcggattgtcggtgtgggctacaacggctttcccaccggttgt
tccgacgacaccctaccctggtgccgtgagggagattttcttgacaccaagtacccctat
gtctgtcatgcagagctcaacgcggttttaaacagcgtgcccggcaacctgacgaactgc
atcctgtatacggcgctgtttccctgtaatgaatgcgccaaagtcattattcaggcaggc
atccaggaagtggtctacctgtccaacaaatatgtcgacacggattcggttcgcgccgcc
aggaccatgttcgatcaagcgggcgttgcctgtcggcaattgtctccatccacgtcgatg
gtcaccatcaccttaacggaaggtgcatga
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