Desulfosarcina variabilis: Dvar_11830
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Entry
Dvar_11830 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_11830
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_11830
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Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
XPS83165
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Position
1335199..1337250
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AA seq
683 aa
AA seq
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MASRITFSLFLFLSVFWVVSTAFAGDAYVLDPMLVTSSAAASGNVKKPPYAPGSVTVITG
AELESKDVISLADAVQGVEGVSIVGGRKSGSISIRGMDSGATLILIDGRRLNSGFSDKAN
GMSEGLQVNHIPPVSAIERIEIIRGPMSAVYGSDALGGVINIITKKNLSQWVGSLGVGVS
VMENDDSGNTYQADAYLSGPLWQDKLSARIWGFKKYHEEDDFIDGFYESDRQDVSLALTF
TPNQANEFYAHVEHIDQDMDSTAGKSSDTSQSVDYDYGDQCIGHKGTYDLFKSEINLYRH
ATERDGTNETWHPETENRVADAKISAPLKNHLATVGGQWKADETKTAAGYKSLDGTYGRK
SEMWEYAIFVEDEWAMLKKFTLTAGLRYQDNEYYADHWTGRLYGVYAIDDAWTIKGGYAG
GYKNPTLRETDPNIGNPQSWRNPVAYTWGNPDLEPEESDNYEIALYYAPMSNFSVNATVF
DTEYENKIINTGRTEFYDADGNLITDDEGNIWGTYLNIGEATVRGLEFAFFYLPVPEVTI
RGNYTYLDSKMDASDAVVYADNGDLIVDWRFLNGKPLVGTPENKIYLYTEWRFHPRFSVN
AALNWQDGESNVKWSRTISKASDYKIWDDELLTVDLGVSCQVTEFLKVNAKVYNVGDETR
DAHADYTYLEEGRRYWLGLRAEF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgaatcactttttctctatttttatttctttctgttttttgggtcgtttcg
accgccttcgcgggtgacgcttatgttctcgatcccatgctggtgacttcttccgccgcc
gcttcgggaaacgtgaaaaaaccgccgtacgcccccggcagcgtgactgtgatcacggga
gcggaactggagtccaaggatgtcatttcgctggctgatgcggtgcaaggtgtcgagggc
gtcagcatcgtcggcggccgcaaatccggtagcatttcgattcggggaatggattccggt
gccacattgatactgattgacggcagacggctcaactcgggattttccgacaaagccaac
ggaatgagcgaagggctccaggtcaaccatatcccgcccgtgtcggccatcgagcgcatt
gaaatcattcgcggccccatgtctgccgtctacggctccgacgcccttggcggcgtcatc
aacatcatcaccaaaaagaacctttcccagtgggtggggtccctgggggttggcgtctcc
gtgatggaaaacgacgactccggcaacacctatcaagccgatgcctatctttccggcccc
ctatggcaagataagttgtcggcgcgcatctgggggtttaaaaaataccacgaggaagat
gatttcatcgacggtttttacgagtcggaccgacaggatgtttcactggccctgaccttc
acgccaaatcaagcgaacgaattctacgcgcatgtggagcatatcgatcaggacatggac
agcacggcaggcaaatcgtccgatacgtcccagtcggttgattacgactacggcgatcaa
tgcatcggccacaagggaacctacgacctttttaaatcggagatcaacctgtatcggcat
gcgaccgagcgcgacggcaccaacgagacctggcatccggaaacggagaaccgggtggcc
gacgccaagatatcggccccgctgaaaaaccatctcgccacggtgggtggccaatggaaa
gcggatgagaccaaaaccgcggccggatataaatccctggatggaacctatggacgcaaa
tccgaaatgtgggagtacgcgattttcgtcgaagacgaatgggccatgctaaaaaagttc
accctgacagcgggactgcgctatcaggataacgagtattacgcagaccactggacgggg
cgcctttacggcgtttacgccatcgacgacgcctggacgatcaagggcgggtatgccggc
ggctacaagaaccccaccttgcgggaaacggatccgaatatcggcaacccccagtcctgg
cggaacccggttgcctacacgtggggaaatcctgacttggagccggaggagtccgataac
tacgaaattgccctgtactatgcccccatgtcaaatttttccgtcaatgccacggttttc
gacacggagtacgaaaataaaatcatcaacaccgggcgcaccgagttttacgatgccgac
ggaaacctgatcaccgatgacgaaggcaacatctgggggacttatctcaatatcggcgaa
gcaacggtgcggggtctggaattcgcgtttttctatctgccggttccggaggtcacgatc
cggggaaactacacgtacctcgattcgaaaatggacgcctccgatgccgtggtatacgca
gacaacggcgatctgatcgtcgattggcgctttctcaacggcaaaccattggtgggaacg
cccgaaaataaaatctacctgtacacagagtggcgcttccatcccaggttttcggtcaat
gcagcgctgaactggcaggacggtgaatccaatgtgaaatggtcccggaccatttccaag
gcgtccgattacaaaatatgggacgatgaacttctcaccgtcgatttgggcgtgtcgtgc
caggtgaccgaatttttgaaagtaaacgccaaagtttacaatgtcggcgacgagacgcgg
gatgcgcatgccgactatacttatctggaagagggaaggcggtactggttgggtctgcgg
gccgaattctaa
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