Desulfosarcina variabilis: Dvar_20330
Help
Entry
Dvar_20330 CDS
T10869
Name
(GenBank) GAF modulated transcriptional regulator related to NifA, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dvar_20330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dvr03000
]
Dvar_20330
Transcription factors [BR:
dvr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dvar_20330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
HTH_8
GAF_2
AAA
AAA_2
Mg_chelatase
AAA_3
AAA_7
bpMoxR
MCM
UBA
TIP49
AAA_16
GAF_3
NUDE_C
nSTAND3
RsgA_GTPase
DUF3801
Motif
Other DBs
NCBI-ProteinID:
XPS84015
LinkDB
All DBs
Position
2276707..2278230
Genome browser
AA seq
507 aa
AA seq
DB search
MKAIEQVTLLYEISNALNEHLDLKKSMFKALDILSNTLQMERGTISILNPLRNEISIEVA
HSLSKSAMDRVKYKLGEGIIGRVIQTGEAVAIPKISEEPLFLNRTASRKMKDMGEISFIC
VPVQKGTQVVGALSVDRAYDPEYSLEDGTKLLSVVATMLARHAINLETIQLEKEALRDEN
KRLKDELENKYRINNIIGNSNKMREVFQMISQVSRSNATVLIRGESGTGKELVANSIHYN
SKRAKMPFVKVNCAAIPNNLIESELFGHEKGAFTGAIKQKAGRFELAHKGTIFLDEIGSI
EPDVQVRLLRVLQEREFERVGGHKTLKVDVRIIAATNKNLEQAVEEDTFRGDLYYRLNVF
PIYMPPLRERKTDILLLADFFLERYAEENAREVKRLSTPAIDMLMAYHWPGNVRELENCV
ERAVLLCEEGAIHSYHLPPTLQTGRESGTLPDLSLEDAVAALEKEMIIDALKNTRGNITT
AAEVLKTTVRKFAYKAKKFGVDYRTYR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgatcgaacaagtcaccttgctttacgaaatatccaatgccctcaacgagcat
ttggatttgaaaaaatccatgttcaaagcgttggatattttatcaaatacgctgcaaatg
gagcgcggcacaatatctatcctgaacccccttagaaatgaaatcagtatcgaggtggcc
cacagtttatcaaaaagcgccatggatcgagtcaaatacaaattgggagagggtatcatc
gggcgggtgattcagaccggtgaagccgtggcgatccccaagatcagtgaagaacccttg
ttccttaatcggacggcatctcgcaagatgaaagacatgggggagatttcgttcatatgc
gtgccagtgcaaaaagggacgcaggtggtgggggccttgagcgtggatcgcgcgtatgat
cctgaatattcacttgaagatggtacgaaactgctttccgttgtggcaaccatgctggcc
cgccatgccatcaatctggaaaccatccagctggaaaaggaagccttgcgggatgaaaac
aaacgcttgaaagacgaactggagaataagtaccgcatcaacaacatcatcggcaacagc
aacaaaatgcgcgaagtgtttcagatgatcagccaggtgtcgcgcagcaacgccaccgtg
ctgattcgcggggaaagtgggaccggcaaggaattggtggccaattccattcactacaat
tccaaacgggcaaaaatgccgttcgtcaaggtgaactgtgcggcgattcccaataatttg
atcgaaagtgaattgtttggccacgaaaaaggggcgtttaccggtgccatcaaacagaaa
gccgggcgctttgagttggcccacaaaggcaccattttcctggatgaaattggaagcatc
gagcccgatgtccaggtgcgcctgttgcgcgtgttgcaggaacgggagttcgaacgggtg
ggggggcataaaaccctcaaggtggatgtgcgcatcattgccgccaccaataaaaatttg
gagcaggctgtcgaagaggacaccttccgcggggacttgtattaccgtctgaatgtgttt
cccatctatatgccaccgttaagggaacgcaagaccgacattttgctcttggccgatttc
tttctggaacgttacgctgaggaaaatgctcgagaggtcaagcggctttccacgccggcc
attgatatgcttatggcctaccattggccggggaatgtgcgcgaactggaaaactgtgtt
gaacgcgccgttttgctctgtgaggagggggctatccacagctatcatctgccgcctacc
ctgcagaccggcagggagagcggtacactgcccgatcttagtctggaagatgccgtggcc
gccctggagaaagagatgatcatcgacgcgctgaaaaatacgcgcggcaatattaccacg
gcagcggaagtcctgaaaaccaccgtgcgcaaattcgcttacaaggccaaaaagtttggg
gtggattaccgcacctatcggtaa
DBGET
integrated database retrieval system
