Desulfosarcina variabilis: Dvar_21470
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Entry
Dvar_21470 CDS
T10869
Name
(GenBank) IhfB2: integration host factor, subunit beta
KO
K05788
integration host factor subunit beta
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvr03032
]
Dvar_21470
03036 Chromosome and associated proteins [BR:
dvr03036
]
Dvar_21470
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_21470
DNA replication proteins [BR:
dvr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Dvar_21470
Chromosome and associated proteins [BR:
dvr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Dvar_21470
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Dvar_21470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
XPS84129
LinkDB
All DBs
Position
complement(2402833..2403108)
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AA seq
91 aa
AA seq
DB search
MNKLELISALKTKADISKSEAAKVVQIFFDSMADAMSDGERVEIRGLCSFFVKEYKSYTG
RNPKTGEKVTIKPKKLPFFKAGKELKERVDQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactggagctcatctccgctttgaaaacgaaagccgatatatccaagtccgaa
gcggcaaaagtggtccagatcttttttgacagcatggccgacgccatgtctgatggagaa
cgtgttgaaattcgtggcttatgcagctttttcgtgaaagagtacaaaagctatacagga
agaaaccccaaaaccggcgaaaaggttaccatcaagcccaagaaacttccttttttcaaa
gccggcaaagaactcaaggaacgggtggatcaatag
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