Desulfosarcina variabilis: Dvar_23340
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Entry
Dvar_23340 CDS
T10869
Name
(GenBank) putative TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_23340
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_23340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
XPS84316
LinkDB
All DBs
Position
2607991..2610054
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AA seq
687 aa
AA seq
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MRKIGCYILWGLMLISVLVAPGFVASGMAADGANENEDEKAASVLRIDDVVVRGEVVNKD
LEATSATVLTNEDITNRIFITPLDIVTLSPGITIRQYKQGGTASNFTMRGFSGNSHGSNT
AIFLDGIPLNEGDGYADTNIINPDEIERVELIKGPASALYGNYASAGSLAYYTKKRVDTN
HIKLHYGSHNTYEANFVGGLSNEKWDQVYSIQNYHTDGYQDNSDWDRLNAAARVTRHLTD
DLNLRLSFRGFNSDWDAPGYINQQQYDDDPTQAVSETNGGGKNRTAARADFDYRINEESK
ALLYFWGYDQQFWRWYASDPTGLAADEVVGNLRDFNRFVYGTGASYNFLGDVFNRELRLT
VGTDYMVEDIGRERWRLLAGYGREKGPKYWDYDIDMETVDVYAEGSFQIIDPLRVILGAR
FDHLSGDLTDHLDNDNEFSMKDQDIFSPKAGLLLGFFDNRLELFTNYGQGFALLPGFSEQ
AAFKQEDWDPQERTQYELGLRSRPFDWMSGEIVGYRLETSKDFIYNADTDDYDNVGETTR
DGIEVQVEFYAFDFGYLRADYGYVDATYDRYESDGVDLSGKTLRSVPQDNFNVEIGYQPP
SGIGGRLSYHYEDSYYLDDANLFMSDSINRVDAQVSYRFGTSAQYMLALDVVNLLDEKYA
DYTSGTTNKTYSPALPLSVYATFVVDF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaataggttgttacatcctttggggattgatgctgatcagcgtcttggtcgct
cctggctttgtggccagcgggatggctgccgatggagccaatgaaaatgaggatgagaaa
gctgcgtccgtacttcggatagacgatgtggtggttcgcggagaagtggtcaacaaggat
ctggaagccacgtcggctacggtgttaactaacgaggacatcaccaaccggatatttatc
acgcccctggatatcgtcacgctttctccaggaataaccattcggcagtacaaacaggga
ggcaccgcttccaatttcaccatgcggggcttcagtggcaattcacacggctcgaacacg
gccatttttctggacggcattccgcttaacgaaggtgacggatatgccgacaccaacatc
atcaatcccgatgagatcgaacgcgtcgaactgatcaagggtccggcatcggccctttac
ggcaactacgcttccgccggcagcctcgcctactatacaaaaaagcgtgtcgataccaat
catatcaagttgcattatggttcccataacacctacgaggcaaactttgtgggagggctc
tccaacgagaaatgggatcaggtttactccatacaaaactaccataccgacggttatcag
gacaattccgattgggatcggctgaatgcagcagccagggtgacccgccatcttaccgat
gatctcaatctacgtttaagttttagagggttcaactctgactgggatgccccaggatac
atcaaccagcaacaatatgacgatgatcccacccaggcggtcagcgaaaccaacggtggc
ggcaagaatcgcacggcggccagggctgatttcgattaccggatcaacgaagaatcaaag
gccctgttgtatttctggggctacgaccagcagttctggcgctggtacgccagtgatccc
actggtctggctgctgatgaagttgtgggcaacctgcgtgattttaatcgattcgtatat
gggaccggcgccagctacaactttttgggggacgtatttaatcgggaactgcgtcttacc
gtcggaactgactatatggtcgaggatatcggccgcgaacgctggcgactgttggccggc
tatggccgggaaaaagggcccaaatactgggattacgatatcgacatggagactgtggat
gtctacgccgagggaagctttcagataatagacccgctgcgggtgattctgggtgcacgc
tttgatcatttaagtggtgatctgaccgaccatttggacaatgacaatgagttttccatg
aaggatcaggacatcttcagccccaaagccggtctcctattggggtttttcgacaatcgg
ttggagttgttcaccaattatgggcaaggatttgccctgctccccggtttttccgaacag
gccgctttcaagcaggaggattgggatccccaggagcgtacccaatacgaactgggactc
cgcagtcgtccctttgactggatgtccggcgaaatcgttggttatcgcctggagaccagc
aaggactttatctacaacgccgacaccgatgattacgacaatgtgggtgaaaccacccgc
gacggaatcgaggtgcaggtggaattctacgcatttgatttcggctatttgcgggccgac
tatggctacgtggatgccacctatgatcgatatgaatccgatggcgtggacctttccgga
aaaacgttgcgcagcgtgccccaggacaacttcaacgtggaaatcggctatcaaccccca
tccgggatcggtgggcgcctgagctaccactatgaagacagttattacctggatgatgcc
aatctgttcatgagtgacagtatcaaccgggtggatgcgcaggtttcctatcgctttgga
acgtcggcgcaatacatgctggccttggatgtcgtcaacctcctagatgaaaaatatgcc
gactacaccagtggaacgacgaacaagacttattcaccggctctgccgctgtctgtttac
gccacctttgttgtcgacttttga
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