Desulfosarcina variabilis: Dvar_23350
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Entry
Dvar_23350 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_23350
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_23350
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XPS84317
LinkDB
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Position
2610054..2612492
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AA seq
812 aa
AA seq
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MTVVRNDDHPEMANSAISGQTIDNRGEMMIFTCKKIKPFVRSGLLFVLVCLFVGSDYCFA
DDSDIKADHQSTNVQNTSNDKVIDLGEVTVTGKIIDDRTANMPAVVESITAEGIERINAV
ETSDVFKYMPGSYLRKLYPGSTNSPLVIRGNNSMMTGRTLVLMDGIRISDFTAAGHSNAP
KWFVVAPQEIEKVDVVYGPFSAALSGNSMSGTAMVTTRFPEKLEIHADAKYFYQNYHEYN
SDENLSGYSAFASAGNKTGRFAYNFWYNRLETENQPISYKTKDAASGDAATGNAVSGWIA
DKDPQGNDRYILGTTGVREIVNNTVKVKLGYDLTDHSQLRFSSVLWDSQQDTDSPETYLT
DASGNPVYSGTVDINGASFTLSDSTYTYSESERQDLLNALTYSLDVPGGLNLMVSASAYN
TLDKVTRTSSDAAPEAESGGEGTVSDGDEGWYTGDLRAAYDLGRQGNHTLAAGYHFDQYY
TDSETWNATDWKNGTRTTLDEGSQGKTRTQAVYLEDTWHIEDQWSIYVGGRYEWWRGFDA
EKSMDGDTGRVTSALDDKDETNFSPKFSTTFIPNDAWRVRFSMARATRYPTVGELYYGGI
TSTGIISNGNPDLEPERSLAKDFTITRLIGQAGEARLTFFEDEIENAIYRQTNVYTNIRN
FQNVDEVRTRGVEFAFNMHRFFVDGLGFFANLAWTDSEILRNDNVPESVGKDFPRVPKWR
VKGVLDYSPGDKWSLTLAGHYSGEQYNELDNSDTEGGYGGVDDFLVFDAKFTYRFLPGWQ
ASVGVDNITDELYHVSHPYPMRTYLAELKYTF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgtcagaaatgatgaccatccggaaatggccaattcggccatttccggacaa
acaatagacaaccgaggagaaatgatgattttcacctgcaaaaagattaagccgttcgtc
aggtcaggcttgctatttgtgttggtgtgtctgtttgtcggctctgattattgctttgct
gacgattccgacataaaggccgaccaccaatcaacaaacgtgcaaaatacttctaatgat
aaggtcatcgatctgggagaggtcacggtgaccgggaaaattattgatgaccggaccgcc
aacatgccggctgtggtggaaagcatcacagccgaaggcatcgaacgcatcaatgccgtg
gaaacctccgatgtgttcaagtatatgccgggttcctacctgaggaaactctacccgggc
agcaccaacagccccctggtgatccggggcaacaattcgatgatgaccggacggaccctg
gtgctgatggacggtatccgcatcagtgatttcacggcggccgggcacagcaatgcgccc
aaatggtttgtcgtggcgccccaggagattgagaaagtggatgtggtttacgggccgttc
tcggcggccttgagcggcaattccatgtccggcaccgccatggtgaccacccgctttcct
gagaagctcgaaatccatgcagacgcaaaatacttttatcagaactatcatgagtataac
tctgacgagaatctgagcggctacagcgcgtttgcctcggccggtaacaaaacgggacgg
tttgcctacaacttttggtacaaccgactggaaacagagaaccagcccatcagttacaag
accaaagacgccgccagcggggatgcagcaaccggcaatgcggtaagcggctggattgcc
gacaaagacccccagggcaatgaccgttatatcctgggaaccaccggcgtcagggaaatc
gtcaacaacaccgtcaaggtcaagttgggctatgacctgaccgatcattcccaactgcgt
ttttccagtgtgttgtgggattcgcaacaggacacggatagccctgaaacctacctgacc
gatgccagtgggaacccagtttactcaggcaccgtggacatcaatggggcaagttttacg
ctcagcgattccacgtatacctactcggaaagcgagcgacaggatctgttgaatgcgttg
acctactctctggatgtccccggcgggttgaacctgatggtcagcgccagcgcttacaac
accttggacaaggttacccggacatcttcggatgcagctcccgaggccgaatctggtggt
gaagggacggtgagcgacggcgatgagggatggtatacgggggatctcagagccgcctat
gacctcggacggcagggcaatcacacccttgctgccggctatcatttcgaccagtactat
acggacagtgaaacctggaacgccacggactggaaaaatggcacgcgtaccacattggac
gagggctcccaaggcaagacacgtacacaggcggtttatctggaggatacctggcatatc
gaagatcagtggtcgatttatgttggcggaagatatgaatggtggcgcggtttcgatgct
gagaaatccatggatggcgacaccggccgggtgacctcggcactggatgacaaggatgaa
accaatttttcacccaagttttcgacaaccttcatccccaatgatgcatggcgtgtgcga
ttttccatggcccgcgccacccgctatcccacggtgggcgaactttactatggcgggatc
acctcaacggggatcatctccaatggaaatccggatctggagccggaacgcagtctggcc
aaggattttaccattacccggttgattggccaggctggcgaagcccgcctgacctttttc
gaggacgagattgaaaacgccatctaccgccagaccaatgtctacaccaatatcagaaac
tttcagaatgtggatgaagtccggacccggggagtggagttcgccttcaatatgcaccgt
tttttcgtggatggcctgggctttttcgccaacctggcctggaccgactccgagatcctg
cgcaacgacaacgtacccgagagcgtgggcaaggattttccgcgtgttcccaaatggcgc
gtcaaaggcgttctagactattcgcccggcgacaagtggtcacttaccctggctgggcat
tactccggtgagcaatacaacgaactggacaatagcgataccgaaggtggctatggtggc
gtcgacgactttctggttttcgatgccaagtttacctatcgcttcctgcccggatggcag
gccagtgttggtgtggataacattaccgacgagctttaccatgtttctcatccgtacccg
atgagaacttatctggcagagctgaagtatacattttaa
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