Desulfosarcina variabilis: Dvar_23670
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Entry
Dvar_23670 CDS
T10869
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dvr Desulfosarcina variabilis
Brite
Enzymes [BR:
dvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Dvar_23670
Transfer RNA biogenesis [BR:
dvr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dvar_23670
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NCBI-ProteinID:
XPS84349
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Position
complement(2654172..2656157)
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AA seq
661 aa
AA seq
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MESGEIVEYIDDQKIICAMVMERGNHRLKLLTEQNREIKLALQRLSHRGTTKLNPTEGRD
RLAALLRKRSNQRNEIAKTITIEELWEILNQEQTWIDLKTMTGLCFPDETDDDHESGVIR
ALFSNRRYFKFKPDRFFPHTIDQVNAIIAQEEKAARNQKLIDSGAAWLQSVRSGVTDDPP
SQHIELTEILKSYYLFEKESPYNNLAKAMLKKAGITSTEVIFSHLVAVGAWTLDENIDLL
RYKLPTHFRPSAIDQAQSTSKKKVDFFKERDRVDLTHLSTITIDGQSTLDFDDALSIQPR
DDHFLVGIHISDVAHYIKKDDVLDQEARFRGSSIYMPDHRISMTPPLLSENLLSLKKDHT
RPTISTMVKISLAGDIISYDIFPSIIRVRHQLSYFEANINAEASEAITQLYDIALKFREK
RLSQGAVQIILPEINVWLDESGKPVVSRINRESPGRMLIAEMMILSNWLSARFLVEKDIP
AIFRSQAKPKNRLLKNGTGTLFQNWMQRKQLNRFVLRPTPEQHCGLGLDAYVTASSPIRK
YFDLVTQRQLRAALGLENAYTAKEIEDTIEVLSQPMANIGRIQFRRNRYWLLKHLEERIG
EKEEAIVLQRRRNAYTILLKNYMIECALPQSSGIDLKPEDLVQVTIQHVNARNNILSVFM
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaggtgaaattgtagaatatattgacgatcagaaaatcatctgcgcgatggtc
atggagcgtggcaatcaccggctgaaattgttgaccgaacagaaccgggaaatcaaactg
gccctgcaacggctgtcacaccgcggaacaacaaagctgaatccaaccgaaggcagggat
cggctggcagcattgttgcgcaagcgatccaaccaacgcaacgaaatcgctaaaaccatt
accatcgaagagctctgggaaattcttaaccaggaacagacctggatcgatctaaaaacc
atgaccggcttgtgtttcccagacgaaacagatgatgatcatgaatcaggggttatccgt
gccctgttcagcaatcgtcgctacttcaaattcaagcccgatcgcttttttccccacact
atcgaccaggtgaatgccattattgcacaagaagaaaaagccgcccggaatcaaaagctg
atcgattccggtgccgcctggctccagtccgttcgatctggggtaacagatgacccacca
tcacaacatatcgaattaactgaaatacttaaatcgtattatctgttcgaaaaggaaagc
ccctacaacaatttagcaaaagccatgttgaaaaaggcaggcatcacatccacagaggta
attttcagccatttggttgctgtaggcgcctggacactggatgaaaacattgacctgctg
cggtataagctaccaacccattttcgaccgtctgccattgaccaagcccagtcaacatca
aaaaaaaaggtcgatttttttaaagaaagggacagagtggatctcacccacctgtccacc
atcaccatcgatggtcaatccacgctggatttcgatgatgcgttgagtatccaaccccgt
gatgatcattttctcgtcggcatccatatatccgacgttgcccactatattaaaaaagac
gatgttctggaccaggaggcaaggttccgcggcagttccatttatatgccggaccatcga
atttccatgaccccgccgttgttgtcggaaaacctgcttagcctgaaaaaggatcatacg
cggccgactatcagcaccatggtcaaaatcagtttggcaggagatatcatcagttacgat
atttttccctcgattatccgcgtcaggcatcaactcagctattttgaagccaatatcaac
gccgaggcaagcgaggccatcacccagctttatgatattgccttaaaatttagagaaaaa
cgcttgagccagggagcggtccaaatcatcctgccggaaatcaatgtctggctggatgaa
tccggcaaaccggtcgtcagccggatcaatcgtgaaagtcccggtcgcatgctgatcgcc
gaaatgatgattctatccaattggctgtcggctcgcttcctggttgaaaaggatattccg
gccattttccggtcccaagccaaacccaaaaatagactgttaaaaaatgggaccggtaca
ttatttcagaactggatgcaacgcaaacaactcaaccggtttgtattgcgccccaccccc
gagcaacactgcggattggggcttgacgcctatgtaaccgcgtcctctccaatcagaaaa
tattttgacctggtcacccagcgtcagttgcgggcggcactgggccttgaaaacgcttat
acggcaaaggaaattgaagacaccatcgaggtgctgtcccaacccatggccaatatcggt
cgaatccagtttcgcagaaaccggtattggctattgaaacatttggaggaacggatcggt
gaaaaggaagaggccatcgtccttcagcgacgccgcaacgcctataccattttgcttaaa
aattacatgattgaatgtgcattgcctcagtccagcggcatcgacctgaaacccgaagat
ctggtacaagtcaccattcagcatgtcaacgcccgtaacaatatcctgtctgtttttatg
ggatag
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