Desulfosarcina variabilis: Dvar_23980
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Entry
Dvar_23980 CDS
T10869
Name
(GenBank) PriA: primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dvar_23980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_23980
Enzymes [BR:
dvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dvar_23980
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dvar_23980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
MarR
AAA_SelU
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XPS84380
LinkDB
All DBs
Position
complement(2687315..2689738)
Genome browser
AA seq
807 aa
AA seq
DB search
MMAVAVALPVHDIYSYSIPAHLAAQAGVGKRVLVPFGRRSVTGYLIGPAHDSTPPEIKHI
LDVLDDQALFPESMLPFFEWIASYYMYPLGQVITTALPAGLNLFDVTLLTVSQAGIQAIT
TASLAPLEARILQALAKGTATTKQLQKRIGQPFSWALIHQMQKRGWILVDRQIKGGRIRP
KTIRWVTVNDTAPPSKRISAQRQTILDLLHSKGDQSVATLKSHIRTAPSLIRAMEKAGLV
SSYEKAVYRDPFGDPIEADTPPDLTTEQAHALETITPRLGKGFGTIVLAGVTGSGKTEVY
LQITQAALDLGLNTVVLVPEIALISQTERRFRARFGDTVAVLHSGLSQGERYDQWQRIVS
GKTRVAIGARSCIFAPFAQVGLIIVDEEHDTAYKQEGGLTYNARDLAVVRARQHGALVVL
GSATPSIQSWYNVTIGKYGAATLHRRVNDKPLPAIQTVDLSQGRDDRGIRRYITLPLQNA
LQQTLDAGNQALIFLNRRGFAAFPICTDCGQPLRCKNCDISLTLHKKINAFRCHYCGFSK
PATSACPTCGAKKIKLLGMGTEKIQETLMQLFPDARVARMDRDTMTRKGSIVKLLKDLKH
RHIDILVGTQMVVKGHDFPGITLVGVICADLSLNFPDFRAGEQTFQLLAQVAGRAGRGDQ
PGKVILQTFNPDHFSILAAKDQDFLAFFDREIGFRKSLGYPPLTRMIALRISGKDAQQTA
DQAQRLGDRCRELLIAGGPYKGTVEVMGPIEAPIARIAGQFRWQIIVKSADTGRLHRFVR
QLNGGAGSAFGKRHVRVIVDVDPFFLM
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgtggctgtggccctaccggttcatgatatttacagctacagcattccggcg
caccttgctgcgcaagccggtgtcggaaaacgcgtcctggtgccctttggcagacgatcg
gtcaccggctatctgattggtccggcacacgattcgaccccgcctgaaatcaagcatatt
ctggacgtactcgatgatcaggccctgtttcccgaatccatgctcccctttttcgaatgg
atcgccagctattatatgtacccgctgggacaggtgatcactacggcgctgcccgccggg
ctcaatcttttcgatgtgaccctgttgaccgtgagtcaggccggcatccaggccatcacc
accgcatcgcttgcccccctggaagcccgcatcctccaagcattggccaaaggcaccgcc
accaccaagcaactgcaaaaaaggatcggccaacccttttcatgggccctgattcatcag
atgcaaaaacgggggtggattcttgtggaccgccagatcaaagggggacggattcggccc
aaaaccatccgttgggtaacggtcaatgatacggccccaccgtccaagcgaatctcagcc
cagcgccagaccattctggatcttctgcatagcaaaggggatcaaagtgtggcgacgctg
aaatctcatatccgtaccgccccgtcgctgatccgggccatggaaaaagccggcctggta
agctcctacgaaaaagccgtgtatcgcgatccctttggcgaccccattgaggcggatacc
cccccagacctcaccacggaacaggctcatgcgcttgaaaccattacccctcgactgggc
aagggatttggcaccatcgtgcttgccggcgttaccggcagcggaaaaaccgaggtgtat
ctgcagattacccaggcagccctggacttgggactcaacacggtggtcctggtgcctgaa
atcgcactgatttcccagactgaacgccgtttccgtgcccgttttggtgacaccgtggcc
gtgctgcacagcggactgtcccagggagaaagatacgatcagtggcagcgcatcgtcagc
ggcaaaacgcgtgtggccattggtgcacgatcgtgcattttcgcaccctttgcccaggtg
ggactgatcatcgtggatgaggaacacgacaccgcctataaacaggaaggcgggttgact
tacaatgccagagacctggccgtggttcgcgcccgccagcatggtgccctggtcgttttg
gggtcggccacgccgtcgattcagtcctggtataatgtgaccatcggcaagtatggggcg
gccacactccatcggcgagtcaacgacaagcctttgccggccatccagaccgttgatctt
tcccagggccgggacgaccgcggcatccggcgttatattacattaccgctacaaaatgca
ctgcaacaaaccctcgacgccggcaatcaggcactgatctttcttaatcgacgggggttt
gccgcctttcccatctgcaccgattgcgggcagcccttgcgctgtaaaaactgtgatatt
tccctgaccctgcacaaaaaaatcaatgcctttcgctgtcattattgcggcttttccaag
cccgcaacatccgcctgccccacttgcggcgcaaaaaaaatcaagcttttgggcatggga
accgaaaaaatacaagaaaccttgatgcagttgtttcccgatgcccgggtggcccggatg
gatcgggacaccatgacccggaaggggtccatcgtcaaactgctcaaggatctgaagcat
cgacacattgacattctggtggggacccagatggtggtcaagggccatgattttccaggc
attacactcgttggtgtgatatgtgccgacctgagcctgaatttccccgactttcgggcg
ggtgaacagacgtttcagctattggcccaggtcgcggggcgcgccggtcgcggagatcaa
ccgggaaaagtgattctgcagactttcaatcccgatcatttcagcattctggccgccaag
gatcaggatttcttggcctttttcgatcgtgaaatcggttttcgcaaatccttgggatat
ccgccgttgacccgcatgatcgccctgcgcatctccggtaaggatgcgcagcaaacggcc
gaccaggcccaacgcttgggcgatcgttgccgcgaactgctgattgcgggagggccatat
aaaggtaccgttgaggtgatgggccccatcgaagcgccgattgcacggatcgccggccag
tttcgctggcagatcattgttaaaagtgccgataccggcaggcttcaccgattcgtcaga
cagctgaacggcggagccggcagcgcgttcggcaaacgtcatgtcagggtcatcgtggat
gtggatccttttttcctgatgtag
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