Desulfosarcina variabilis: Dvar_25550
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Entry
Dvar_25550 CDS
T10869
Name
(GenBank) putative ABC transporter, periplasmic binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02010
ABC transporters
dvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dvar_25550
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dvar_25550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_25550
Transporters [BR:
dvr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Dvar_25550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
TAdV_Fibre-like_head
Motif
Other DBs
NCBI-ProteinID:
XPS84537
LinkDB
All DBs
Position
complement(2883091..2884539)
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AA seq
482 aa
AA seq
DB search
MSTTGSHAPGQSIDRIPPFDIFIFHWAFDIHGHSDFEKQGNLQNLHGIALSSAPRHRSLN
RLRARQVIRWTALLIILLVGMVPVSDAQTPVVIGVATSTTTLEGRESLMAAQLAVEEINQ
GGGVRLNSQAVPLKIEILDLKDAAPQVNAETALKQLETFLNTRPVRAVLIGPFRSEVLLP
AMDVIAKHQIPMIETIAMTPAMESKVLNTPAYRFLFRTGLNTRYLADALIGSMRFLKKRY
DFQRVYLMIQDVAWARSTASLILKLYFKRGGWEILGIRHYPYETIDFGTGLQEATQKGAQ
VILPIFDTPHSGQLVIQWKTRQTPGLLCGFISPMMGPGAWNHFNGQISGALNIIFELGNI
PSKKFPPATRFYNAFSRRYGRQIEAGHGPAPTYEAVYLLARAIEKTGSLDPDQLVLALEK
GNHSGAMGRMDFNKGHQVIFGTSPENAAVACLIQWQKPGRRVIVYPPALAEGEIKLPASL
ER
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaccggctcccatgccccagggcaatcgatagatagaataccaccatttgac
attttcatttttcattgggcatttgacattcatggacactctgatttcgaaaagcaaggc
aacctgcaaaatctgcatgggattgccctgtccagcgccccccgccaccgctcgctgaat
cggcttcgcgcccggcaggttattcgttggacggcccttttgatcatcctcctggtaggg
atggtccccgtatcggatgcacaaacgccggtggtcatcggcgtggccacgtcaaccacg
accctggaaggcagggaaagtctcatggccgcccaactggcggttgaggaaattaatcaa
ggcggcggcgtcaggctcaacagccaagccgttccgctaaaaattgaaatcctcgatctc
aaggatgccgcgccccaggtaaatgccgaaaccgcccttaagcagcttgaaacgtttctt
aacacccggcccgtccgggcggtgttgatcggtccgtttcgatcagaagtccttttacct
gcaatggatgtgattgccaagcaccagattcccatgatcgaaacgattgccatgaccccg
gccatggagtccaaggtgctaaataccccggcataccgattccttttcagaaccggattg
aacacccgctacctggccgacgcacttatcggatccatgcgctttttaaaaaagcgctac
gattttcaacgggtgtatttgatgatccaggatgtggcctgggcgcgcagtaccgcgtcg
ctgatccttaaattgtatttcaagcgaggcggatgggaaatactgggcatccgtcactac
ccttatgaaacgattgattttggtacggggttgcaggaagccacccaaaaaggtgctcag
gtgatattgcctattttcgatacacctcacagcgggcagctggtgatccaatggaaaacc
cggcagaccccggggctgctgtgcggctttatctcccccatgatgggtcctggcgcatgg
aaccattttaacggccaaatcagtggggcgctcaatatcatttttgaactgggcaatatt
ccctcgaaaaaatttccgccggcgacacgtttctataacgccttcagccggcgctatggc
aggcaaattgaggccggccatggaccggcgcccacctacgaggccgtgtatctgctggcc
cgggccattgaaaaaaccggcagtctcgatccggatcagcttgttttggcccttgaaaag
ggtaaccattcgggtgccatgggacggatggatttcaataaggggcatcaggtgattttc
ggtacgtcgcctgagaacgcggcggtcgcttgcctgattcaatggcagaaacctggtcga
cgggtaatcgtctatccgccggccctggccgaaggtgaaatcaagcttcccgcttccctt
gaacgataa
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