Desulfosarcina variabilis: Dvar_25780
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Entry
Dvar_25780 CDS
T10869
Name
(GenBank) DdlB2: D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00470
D-Amino acid metabolism
dvr00550
Peptidoglycan biosynthesis
dvr01100
Metabolic pathways
dvr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dvar_25780
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dvar_25780
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Dvar_25780
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dvr01011
]
Dvar_25780
Enzymes [BR:
dvr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Dvar_25780
Peptidoglycan biosynthesis and degradation proteins [BR:
dvr01011
]
Precursor biosynthesis
Amino acid ligase
Dvar_25780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
XPS84560
LinkDB
All DBs
Position
complement(2913553..2914578)
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AA seq
341 aa
AA seq
DB search
MTLSIGLTYDLRSVYLTEGFSEEETAEFDRDDTVAAIESTLQSLGHRTERIGHSRQLAAA
LVAGSRWDLVFNIAEGLYGIGREAQVPALLDMYQIPYTFSDPLVMALTLHKGMTKHVIRD
AGIPTSDFLVVENIADTSKIKFAPPYFVKPVAEGTGKGVTPQSIVRRRKDLVAACLRLID
TYKQPVIVEKFLPGREFTTGIVGSGNNASAIGTIEVHLLDNAEAEVYSYVNKEECESRVE
YRLVRPGDDLVVAEAERVALSAWRVLGCRDGGRIDLRCDAHGRPQFIEVNPLAGIHPEHS
DLPIICNHLGIAYRDLIGWIVDSAAMRIQSVEDKRGAAWCI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacactgtcaatcggattgacctatgacctgcgctccgtttacctgacggagggcttt
tccgaagaggaaaccgccgagttcgaccgtgacgataccgtggcggccattgaatcaacg
ctccagtcattggggcaccgtaccgagcgcatcggccacagtcgccaactggccgcggcc
ctggtggccggctctcgctgggacctggtgttcaatatcgccgagggcctttacggtatc
ggccgcgaggcccaggtgccggcccttctggatatgtaccagatcccgtacacattctcg
gatcctctggtgatggcgctgaccctgcataagggcatgaccaagcatgtgatccgcgat
gccgggatccccaccagtgatttcctggtggttgaaaacattgccgacaccagtaaaatc
aagtttgctccgccttacttcgtcaaaccggtggccgagggcaccggcaagggggtcacg
ccgcagtccatcgtacgccgccgcaaggatctggtcgcggcttgcctgcgcctgatcgac
acctacaagcaaccggtgattgtcgaaaaattcctgcctggccgggagttcaccaccgga
atcgtgggatccggcaacaacgccagtgcgatcggcaccatcgaggtccatctgctcgat
aatgccgaggccgaggtctactcctatgtcaacaaggaggagtgcgaatcccgggtcgaa
taccgcctggtccggcctggcgatgatctggtggtggccgaagccgagcgcgtggccctg
tcggcctggcgggtgcttggctgccgtgacggcggacgcattgatctgcgctgcgacgca
cacgggcggcctcagttcattgaggtcaaccccctggccggcattcatcccgagcactcg
gatctacccatcatctgtaaccatctgggcattgcctaccgggatctgatcggctggatt
gtcgattctgcggcgatgcgcattcagtcggtcgaagacaaaagaggagcggcctggtgc
atatag
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