Desulfosarcina variabilis: Dvar_27070
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Entry
Dvar_27070 CDS
T10869
Name
(GenBank) HdrA5: CoB--CoM heterodisulfide reductase, iron-sulfur subunit alpha
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00680
Methane metabolism
dvr01100
Metabolic pathways
dvr01120
Microbial metabolism in diverse environments
dvr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Dvar_27070
Enzymes [BR:
dvr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
Dvar_27070
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
Dvar_27070
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
Dvar_27070
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Dvar_27070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NAD_binding_8
FAD_oxidored
Pyr_redox
Fer4_20
Pyr_redox_3
DAO
FAD_binding_2
Thi4
GIDA
HI0933_like
FAD_binding_3
Fer4
Fer4_10
AlaDh_PNT_C
NAD_binding_7
Fer4_7
Amino_oxidase
Fer4_9
Fer4_21
Fer4_6
Fer4_2
3HCDH_N
MurD-like_N
Fer4_16
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
XPS84689
LinkDB
All DBs
Position
complement(3062960..3067396)
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AA seq
1478 aa
AA seq
DB search
MTHTTTGAVLVVGGGIAGIQAALDLADSGYRVVMAEQRSAIGGVMSQLDKTFPTNDCSMC
IISPKLVEAGRHLNIDLFTMTDVETIEGQAGNFSVTLRQRPRYIDMEKCTACGECSKVCP
IDVSNDFDQGLADRKAAFKRYPQAMPSAYTIEKKGTAPCKAACPANPSFQGCLALMAQGK
YKEAFELFRSEHPFPGVCGRVCHHPCETACTRGQVDAPVSIMALHRFLADWARANGITFV
PEKKALRSEKVAVVGSGPAGLACAYFLAIEGFSVTVFEKHDVLGGMLVLGIPAYRLPREI
VDEEIAVLRQLGVEFKTGVDLGSDVTVGQLRDQGYGAFFMAIGSQECKLLGIEGEEIKGV
WPGVDYLLRTNLGEKIDLGNRVAVIGGGNVAMDAVRTALRCGAKQPFIIYRRSEAEMPAS
AEEIAECREEGIEIMTLVNPVRVVETDGRVTAIECIRMQLGEPDASGRRRPEPIAGSEFT
IAVDAVVPAIGQESDWACLTDECACTLSDWGTMIVDPVTLQSADADIFAGGDAVSGPKTV
VEAIAAGKTAAESICRFLAGEDLAAGRAPSLTPVEDVDLSAAVPLARQPMPVADPATRKT
TFDEVQLGLDEAAVSREVQRCLACGVCSECYQCVSACLAGAVCHEMTEQIHQVQVGAVIL
APGFTAFDPSIYETYSYSSHPNVVTSLEFERILSASGPYAGHLVRPSDRQPPRKIAWLQC
VGSRDLNACDNGYCSSVCCMYANKQAVIAKEHSETELDTAIFFMDLRTFGKDFDKYATRA
REDHGVRHVRSRIHSVFPAEGDRLRIVYASEAGRSVEEQFDMVVLSVGLAPNPDAIALAH
RLGVDLNHYNHAKTGCLTPVATNRKGIFVCGAFQEPKDIPHSVMEASAAASATAEMLADS
RWTESRRHELPPELDVSGQGPRIGVFVCNCGINIGGIADVPAVRDYAAGLPNVVHVEDNL
FTCSQDAQDHMKAVIREKGINRVVVASCSPRTHEPLFQETIRDAGLNRYLFEMANIRDQN
TWVHMNEPARATAKAKDLVRMAVAKAAYIEPLHQVSLTITKTALVVGGGVAGMEAALGVA
DQGCDVVLVERSDQLGGVANLLNATWQGEPIVPYLARTIDRIQTHPRIRLFTRSQVKRTT
GSIGNFSTTLVTGNGDQTQTVIAHGATILATGGGEYKPDLYLYGRHPNVLTHLDMDAAMA
VKDKRLLRARSVVFIQCVGSRDDNRPYCSKICCTHSLKSALAIKQIHPQKKVSIVYRDIR
AYGFREDLYKQAREAGILFIRYEPETPPRVSTDADNHLLLEVTDHVLRMPVRLRPDLLVL
ATGVVPNANRDVYELFKVPVNASGFLVEAHAKLRPVDFSSEGIYLAGLAHYPKPLEESIA
QARAAASRAMTLLSRDAIMVGGVVATVDTGKCAACLTCVRACPYDIPRIDEHSHAVIDPA
QCHGCGTCVAECPGKAITLAHYTDEQLIAKIEALFVAA
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgacacacacaaccacaggtgcggttctggtcgtcggtggggggattgccggcattcag
gccgcgctggacctggccgattcaggctatcgggtcgttatggccgagcagcgttcggcc
atcggcggggtgatgtcccaactggacaagaccttccccaccaacgactgctccatgtgc
atcatctcccccaagctggtggaagccggccgccatctgaacatcgacctgttcaccatg
accgacgttgaaaccatcgaggggcaggcaggcaacttctccgtcaccctgcgccagcga
ccgcgctacatcgacatggagaaatgcacggcctgcggcgaatgcagcaaggtgtgcccc
atcgatgtatccaacgacttcgatcagggcctggcggatcgcaaggcggccttcaagcgc
tatccccaggccatgccgtcggcctacaccatcgagaaaaaaggcacggcgccctgcaag
gccgcctgtccggccaatcccagtttccagggctgcctggccctcatggcccagggcaag
tacaaggaggcgttcgaactgttccgcagcgaacaccccttccccggcgtctgcggccgg
gtctgccatcacccctgcgagacggcttgcacccggggacaggtcgacgcaccggtgtcc
atcatggccctgcaccgatttctggccgactgggcccgcgccaacggcatcaccttcgtt
cctgagaaaaaggccctgcgatcagagaaagtcgccgtggtgggcagcggtccggccggc
ctggcctgcgcctattttctggccatcgaggggttttcggtgactgtcttcgaaaagcac
gatgtactgggcggcatgctggtgctgggtattccggcctaccgcctgccccgggaaatc
gtcgacgaggaaatcgccgtattgcgccagctcggcgtcgaattcaaaaccggcgtcgac
ctgggcagcgatgtgaccgtcggccagctgcgcgaccagggctacggggcctttttcatg
gccatcggctcccaggagtgcaaactgctgggcatcgagggagaagaaataaagggcgtg
tggcccggtgtggattatctgttgcgcaccaacctgggcgagaagatcgatctggggaac
cgcgtggccgtgatcggcggcggcaacgtggccatggacgccgtgcgcaccgccctcagg
tgcggcgccaaacagccctttatcatctaccgccgcagcgaggccgagatgccggccagc
gccgaggagatcgccgaatgccgtgaggagggcatcgagatcatgaccctggtcaatccc
gtgcgggtggtcgaaaccgacggccgggtcacggctatcgaatgcattcgcatgcagctg
ggcgagccggacgcatccggcaggcggcgtcccgagcccatcgctggatccgaattcacc
atcgcggtcgatgcggtggtgccggccatcggccaggagtcggactgggcctgtctcacc
gatgagtgcgcctgcaccttgagcgactggggcaccatgatcgttgatccggtgacgttg
cagtccgccgatgccgacatctttgccggcggcgacgcggtcagcggccccaaaaccgtt
gtcgaggccattgccgccggaaaaaccgccgccgaatcgatctgtcgctttctggccggt
gaggatcttgcggccggtcgggcaccatcgctgacaccggtcgaggatgtggacctgtcc
gcggcggtgcccctggcccggcagcccatgcctgtggccgacccggcaacccgaaaaacc
accttcgacgaagtccagttgggcctggacgaggcggcggtgagccgggaagtccagcgg
tgcctggcctgcggcgtgtgctcggagtgctaccagtgcgtgtcggcctgcctggccggc
gcggtctgtcacgagatgaccgagcagatccatcaggttcaggtaggggccgtgatcctg
gccccgggctttaccgcctttgatccctccatctacgagacctacagctacagcagccat
cccaacgtggtcaccagcctggaattcgagcgcatcctctcggcgtccggcccctatgcc
ggacacctggtgcggccctcggatcgtcagccgccgcgcaaaatcgcctggctgcaatgc
gtgggctcacgggatctcaacgcctgcgacaacggttactgctcgtcggtttgctgcatg
tatgccaacaagcaggcggtgatcgccaaggaacacagcgaaacggaacttgacaccgcg
atcttcttcatggacctgcgcacctttggcaaggatttcgacaagtacgccaccagggcc
cgcgaggaccacggggtgcgccacgtccgctcgcgcatccattcggtgtttccggccgag
ggcgaccggctgcgcatcgtctatgccagcgaagccggcagaagcgtggaggagcagttc
gacatggtggtcctgtccgtgggactggcccccaaccccgatgccatcgccctggcccat
cgcctgggcgtggatctgaaccactacaaccacgccaaaacaggctgtttgacaccggtg
gccaccaaccgcaagggcatcttcgtctgcggcgcattccaggaacccaaggacattccc
cactcggtgatggaagcctcggccgccgcctcggccaccgccgagatgttggccgactcg
cgctggaccgaaagccgccgccatgagctgcccccggaactggatgtgtccggccagggg
ccgcgcatcggggtcttcgtgtgcaactgcggcatcaacatcggcggcattgccgacgtg
ccggccgtgcgcgactatgccgccggcctgcccaatgtggttcacgtggaggacaacctg
ttcacctgtagccaggacgcccaggaccacatgaaagcagtcatccgagaaaaaggcatc
aaccgggtggtggtggcctcctgctccccccgtacccacgagccattgttccaggagacc
atccgtgatgcaggactcaaccgctacctgttcgagatggccaacatccgtgaccagaac
acctgggtacacatgaacgagccggcgcgggccacagccaaggccaaagatctggtgcgc
atggctgtggccaaggccgcctatatcgaaccgctgcatcaggtgagcctgaccatcacc
aagaccgccctggtggtgggcggcggcgtggccggcatggaagcggccctgggtgtggcc
gaccagggctgcgacgtggtgctggtggaacgatcggaccagctgggcggcgtggccaac
ctgctcaatgctacctggcagggagaacccatcgtcccctacctggcccgaaccatcgac
cggatccaaacccatccgcgtattcgtctgtttacccggtcccaggtcaagcgcacgacg
ggcagcatcggcaacttctccaccaccctggttacgggtaacggcgatcaaacgcaaacc
gttatcgcccacggggccaccatcctggccaccggcggcggcgagtacaagccggatctt
tatctttacggccggcacccgaatgtactcacccacctggacatggatgcggccatggcg
gttaaagacaaacggctgctgcgggccaggagcgtggtctttatccagtgcgtgggctcc
cgggatgacaaccggccctattgcagcaagatctgctgcacccacagtctgaaaagcgcc
ctggccatcaaacagatccacccccaaaagaaggtgagcattgtctaccgcgacatccgc
gcctacggcttccgcgaggacctttacaagcaggcccgcgaagcgggcatcctgttcatc
cgctacgagccggaaacaccgccccgggtgtccaccgatgccgacaatcacctgctactg
gaggtaaccgaccatgtgctgcgcatgccggtgcggctgcggcccgaccttttggtcctg
gccaccggcgtggtgccaaacgccaaccgcgacgtgtacgagcttttcaaggtgccggtc
aatgccagcggttttctggtcgaggcccatgccaagctgaggccggtggacttctcctcc
gagggaatctacctggccggcttggcccactaccccaaacccctggaagagagcatcgcc
caggcccgggccgccgcctcacgggccatgaccctgctctcccgggatgccatcatggtc
ggcggcgtggtggccacggtggacacgggcaagtgtgccgcctgcttgacctgcgtacgc
gcctgtccctatgatattccccgcatcgacgagcacagccatgcggtcatcgacccggcc
cagtgccatggctgcggcacctgcgtggccgaatgtccgggcaaggcgatcaccctggcc
cattataccgacgaacagctgatcgccaagatcgaagcactttttgtggctgcgtaa
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