Desulfosarcina variabilis: Dvar_28030
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Entry
Dvar_28030 CDS
T10869
Name
(GenBank) FadD4: long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00061
Fatty acid biosynthesis
dvr00071
Fatty acid degradation
dvr01100
Metabolic pathways
dvr01212
Fatty acid metabolism
dvr02024
Quorum sensing
dvr04146
Peroxisome
Module
dvr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Dvar_28030
00071 Fatty acid degradation
Dvar_28030
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dvar_28030
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dvar_28030
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dvr01004
]
Dvar_28030
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvr04147
]
Dvar_28030
Enzymes [BR:
dvr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Dvar_28030
Lipid biosynthesis proteins [BR:
dvr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Dvar_28030
Exosome [BR:
dvr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Dvar_28030
Exosomal proteins of breast cancer cells
Dvar_28030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
XPS84785
LinkDB
All DBs
Position
complement(3181782..3183281)
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AA seq
499 aa
AA seq
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MNLGNIIDQSAHFFPEHPAICIDDQTISYGKLKERTNRVATALIASGISPGDRVALNVPN
SLEWIAFYYGAIKCGAVAVTLPGLMTDAELGYLINDAQPRCILTTDDKVSQLERLRGPGI
LETLISPSGDMPFERLCENGQPEFNPIDRDRSDTAAILFTGGTTGIPKGVMLSHENIYTA
INNVVFNERSSENDRALCFLPFNHVFGQIHIMNATLLSGGCIELIPGFDLEKVLTLTAAD
RITKLYAVPTVYVRLLAIKDLRQRLGAVRYCFSAAASMAVELVQKWKQQTGLNIHEAYGM
TESASMVTYNHYYRHQVGSVGTPVGCTEVQIRNAEGAPVDQGHEGEICIRGRNIMQGYLN
RPEETQASFWGEWFRSGDVGFINDSGYLFIVDRIKDLIITGGENVYPREIEEVLYTFPEI
SECAVIGLPDKEWGERVTAMIVPAMGHTVDIDALKTVLKKQLSAYKIPKQYNIVEELPKS
PSGKILKRNIRKTVQEAEK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttggcaatatcatcgatcaatcggcccatttctttcccgaacatcctgcgatc
tgcattgacgatcaaaccatttcctacggcaaattaaaggagcgaaccaaccgtgtggcc
acggcattgatcgcatcgggcatttccccaggcgatcgggtggccttgaatgtccccaat
tcccttgaatggattgctttttattacggagcgatcaaatgcggtgccgtcgccgtcacc
ctacccggtttgatgaccgatgccgaactggggtatctgatcaacgacgcgcagccccga
tgcatccttacaaccgacgataaagttagtcaattagagcgattacgaggtcccggcata
ctggagacgctgatcagcccgtcaggtgacatgccttttgagcgtctgtgtgaaaacggt
cagccagaattcaatccgatcgaccgggatcgaagtgatacggcggcaatcctgtttacc
ggcggcaccaccggcattcccaaaggcgtgatgctcagccacgaaaacatttataccgcc
atcaacaatgttgtattcaacgaacgttccagcgaaaacgaccgcgccctgtgttttttg
ccgttcaaccatgtttttggtcaaatccacatcatgaatgccacacttctcagcggcgga
tgcattgagctgattcccggctttgatctggaaaaagttctcaccctgaccgcggccgat
cgcattaccaagctttatgccgtgccaacggtttatgtgcgcctgttggccataaaagac
cttcgccaacggctcggtgcggtgcgctactgtttttcagctgccgccagcatggccgtc
gagctggttcaaaaatggaagcagcaaaccggccttaacattcacgaggcttacggcatg
acggaaagcgcctccatggtgacctacaatcactactatcggcaccaggtgggatcggtg
ggcacaccggtgggctgcaccgaggttcaaatccgcaatgccgagggagccccggtcgac
caaggtcatgaaggagaaatctgcattcgcggtcgcaacatcatgcaggggtatctcaac
cggcccgaagaaacccaggcatccttctggggagagtggtttcgcagcggtgatgtcggt
ttcattaacgattccggttaccttttcattgttgaccggatcaaggatttgatcatcacc
ggtggagagaatgtctaccctcgggaaatcgaagaggtcctgtacacgtttcctgaaatt
tcggaatgcgctgtgatcggtcttcccgacaaggaatggggcgagcgcgtgacagcgatg
attgttccggccatgggccacacggtcgatatcgatgcgctcaaaacggtgctaaaaaag
cagttatccgcttacaaaatccccaagcaatacaatattgttgaggaattacccaaaagt
ccatccggaaaaattctcaaacgcaacattcgaaagacggtccaggaggcagaaaagtga
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