Desulfosarcina variabilis: Dvar_36470
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Entry
Dvar_36470 CDS
T10869
Name
(GenBank) IhfB3: integration host factor, subunit beta
KO
K05788
integration host factor subunit beta
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvr03032
]
Dvar_36470
03036 Chromosome and associated proteins [BR:
dvr03036
]
Dvar_36470
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_36470
DNA replication proteins [BR:
dvr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Dvar_36470
Chromosome and associated proteins [BR:
dvr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Dvar_36470
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Dvar_36470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XPS85629
LinkDB
All DBs
Position
complement(4100834..4101127)
Genome browser
AA seq
97 aa
AA seq
DB search
MNKLELIEKISEATDLPRSQAHKIVDIFFNSMAKALAQGERVEIRGLCSMFVKHYDEYIG
RNPKTGKKVKIKPKKLPFFKAGKELKERVDMPNGVGS
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacttgaactgatcgaaaaaattagtgaagccaccgacctgcccaggtcccaa
gctcataaaattgtagacatctttttcaattcaatggccaaggccctggcccagggggag
cgagttgaaatacgcgggctgtgcagtatgtttgtcaaacattacgatgaatatattggc
cggaatcctaaaaccggaaaaaaggtaaagatcaaacccaagaaactgccgttcttcaaa
gccggaaaagagctgaaggaaagggtggatatgccaaatggggtcgggagttaa
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