| Entry |
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| Name |
(GenBank) DnaE1: DNA-directed DNA polymerase III, subunit alpha
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| KO |
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| Organism |
dvr Desulfosarcina variabilis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:dvr00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dvar_37180
03430 Mismatch repair
Dvar_37180
03440 Homologous recombination
Dvar_37180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:dvr03032]
Dvar_37180
03400 DNA repair and recombination proteins [BR:dvr03400]
Dvar_37180
Enzymes [BR:dvr01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dvar_37180
DNA replication proteins [BR:dvr03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dvar_37180
DNA repair and recombination proteins [BR:dvr03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dvar_37180
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(4173932..4176967)
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| AA seq |
1011 aa
MIPLTLRSHYSLMWGTDSPAAICRAARQMGYNRLALTDTDNLYGLWPFLYACREEGLTPI
VGAEITDPKASRRAVCLVKNADGYANLCRLITRRHQDPAFDLTAGLPPLADGLQVLTGHS
DLLAAWHRAGIQPMAALPRRAPSPFHPLVRTARQLSLPLVATPGNFFLHPDGYNVHRLLR
AIAGNTALSRLSSGDTAPVDAWLAPPQAYQRRFATMPEALDQTHRLAGELTFSGPEFGLV
MPPWEDASGRSADDCLRRAAVAGARRRYGPELGEAVVDRLEHELATIARMGFSAYFLVVK
KIVAQSPRTCGRGSAAASLVAYCLGITNVCPVKHNLYFGRFLNPGRSDPPDIDVDFAWNE
RDAVIDGVLDRFAGRAAMVASHILFQPRMALRETAKVFGMPEAEIGKITRRLPWFWRQGE
LDAGLIGNLRQRPETRHLDFAQPWPQIMALAQRIIGIPRYLSVHPGGVVITPRAIDRYVP
IENAPKGVPVMQWDKDGAEDAGLVKIDLLGNRSLGVIRDTLSGMRANGIAFDEAHWTPED
DPDTRRTVARGKTMGCFYIESPAMRLLHQKAGNGDFEHLVIHSSIIRPAANTYIQAYLKR
LHGAPWDPIHPLLADVLDETFGIMVYQEDVSRAAVALAGFSDAEADGLRKIIAKKDRQRQ
LDDYHDRFMAGAAARDVSAAQATAVWQMMMSFSGYSFCKPHSASYARVSFQAAFLKTHFP
AEFMAGVISNQGGFYSTFAYVSEARRLGLVIDPPDINVSQIQWEGKEQRLRVGLMAVGGL
SNTTCKAIIACRQTGPFTTMTDFLKRVCPDHDEARALIHCGALDSLDTDQSRTRLQWALA
RWQAHQKQIQGQADLFSFRPVPASHPPAPVFPPEDPMARLRREYAVLGFLCHQHPITLFS
KAIGHRHTVKANQLARRKGQRVSFAGWLVTGKVVHTRNKDPMQFLTFEDDTGIVETTFFP
DAYRRFCHILDRHRPYLLSGIVDENWTVVTLTVDGVERIGRLGGGSVMGDG |
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| NT seq |
3036 nt +upstreamnt +downstreamnt
atgattcccctcaccctccgctcccactattctctcatgtggggcaccgactcgccggcg
gccatctgccgggcggccaggcaaatgggctacaaccggctggccctgaccgacacggac
aacctctacggcctgtggccgtttctgtatgcctgccgggaggaaggactcacccccatc
gtaggggccgaaatcaccgatcccaaggccagccgacgggctgtctgcctggtcaagaat
gccgacggttatgccaacctgtgccgtttgatcacccggcgtcaccaggacccggccttt
gacctgacggccggcctgccgcccctggcagatggtctgcaagtcctcaccggtcatagc
gatctgctggccgcctggcaccgggccggcatccagcccatggccgccctgccgcgccgg
gcgccctcgcccttccatcccctggtacgaacggcccgtcaattaagtctgccgctggtg
gccacacccggcaatttttttctgcacccggacggatacaacgtccaccgattgctacgg
gccatcgccggcaacacggccctttcccggctgtcctccggcgacacagccccggtcgat
gcctggctggccccgccgcaagcataccaaaggcggtttgccaccatgccggaagcactg
gaccagacccatcgtctggccggcgagctgaccttcagcggccctgagttcgggctggtc
atgccgccctgggaagatgcaagcggccgcagcgccgacgattgcctgcgccgggccgcc
gttgccggtgcccgcaggcgatacggaccggaactgggcgaagccgtggtcgatcggctg
gagcacgagttggccacgatcgcccgcatgggattttcagcctatttcctggtggtcaaa
aagattgtcgcccaaagcccgcgcacctgcggtcgggggtcggctgccgcctcactggtg
gcgtattgcctgggcatcaccaatgtctgtccggtcaagcacaacctttacttcggccgt
tttctcaatcccggacgcagtgatccgccggacattgacgtggattttgcctggaatgaa
cgcgatgcggttatcgacggtgtgctggatcggttcgccggccgcgcggccatggtggcc
agccacatcctgttccagccgcgcatggccttgcgggaaaccgccaaagtattcggcatg
cccgaagccgagatcggaaagattacccggcggctgccctggttctggcgtcagggagaa
ctggatgccggcctgataggcaacctgcgccagcgcccggaaacccgccacctggatttc
gcccagccctggccccaaatcatggccctggcccagcggatcatcggtatcccgcgttac
ctgtccgtgcatcccggcggggtggtgatcacaccaagggccatcgaccgctacgtgccc
atcgaaaacgcgcccaagggcgtcccggtcatgcagtgggacaaggacggcgccgaagat
gccggcctggtaaaaatcgatcttctgggcaaccgcagcctgggcgtgatccgtgacacc
ctttccggtatgcgggccaacggcatcgcctttgacgaggcccactggacgcccgaagat
gatccggacacccgccgaacggtagcgcgcgggaagaccatgggctgcttttacattgaa
agcccggccatgcgcctgttgcaccagaaagccggcaacggcgacttcgagcacctggta
atccactcctccatcatccgcccggccgccaacacgtatatccaggcatacctcaaacgc
ctgcacggcgccccgtgggatcccatccatccccttttagccgacgtactggacgaaact
ttcggtatcatggtctaccaggaagatgtctcccgggctgccgtggccctggccggattc
tccgacgccgaggccgacggcttgcgtaaaatcatcgccaaaaaagatcggcagcggcaa
ctggacgattaccacgaccggttcatggctggtgccgccgcccgggacgtgtcggcggcg
caggccaccgcggtgtggcagatgatgatgagcttttccggctactcgttttgcaaaccc
cacagcgcctcctacgcccgggtctccttccaggctgcctttcttaaaacccatttcccg
gcggaattcatggccggggtgatcagcaaccagggcggattttacagtaccttcgcctat
gtctccgaggcccggcgtctgggactggttatcgatccgccggacatcaatgtcagccag
atccagtgggagggcaaggaacagcgcctgcgggtggggctgatggctgtgggcgggctg
agcaataccacctgcaaggccatcatcgcctgccggcagaccggtccgttcacgaccatg
actgattttctgaaacgggtctgccccgaccatgacgaggcccgggccctgatccactgc
ggtgccctggacagcctggatacggatcagtcccgcacacgcctgcagtgggccctggcc
cgctggcaggcgcatcaaaagcaaattcagggccaggccgatcttttctcctttcggccg
gtcccggcaagccatccccccgcccctgtttttccgcccgaagaccccatggctcgcctg
cgccgggagtatgcggtactgggttttttatgccaccagcatcccatcaccctgttcagt
aaggccatcggtcatcggcacacggtcaaggccaatcaactggcccggcggaaaggccag
cgggtaagctttgccggctggctggtcaccggcaaggtggtccacacccgcaacaaagat
cccatgcaatttctcactttcgaggatgacaccggtatcgtggaaaccacgttttttccc
gacgcctaccgacgtttctgccatatactggaccgccatcggccctacctgctctccggc
atcgtggatgaaaactggacggtggtgacactgacggtggatggagtggagagaatcgga
aggttggggggaggatcggtgatgggtgatgggtaa |
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