Desulfosarcina variabilis: Dvar_39260
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Entry
Dvar_39260 CDS
T10869
Name
(GenBank) FlgD: predicted flagellar hook capping protein
KO
K02389
flagellar basal-body rod modification protein FlgD
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dvar_39260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dvr02035
]
Dvar_39260
Bacterial motility proteins [BR:
dvr02035
]
Flagellar system
Flagellar assembly proteins
Rod and hook
Dvar_39260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FlgD
FlgD_ig
FLgD_tudor
CHU_C
DUF5052
Big_13
DUF4998
DUF2271
ChaB
Motif
Other DBs
NCBI-ProteinID:
XPS85908
LinkDB
All DBs
Position
4418411..4419094
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AA seq
227 aa
AA seq
DB search
MTVMSVSEVYSQANTTTSTTEAVMGKDDFLTLLITQLKNQDPLNPSDSTEFTAQLAQFSS
LEQLQNINDALASFEVYQSTANNIQASNFIGQTVTAAGDTISVSNGASDSLSVALDAPAQ
TVYIQIYDAYGEYVTDIEAGSLDAGMHTIAWDATDQYGAAVEDGRYTFSVMAVDGDGNSV
SSTSYITGQVTGVDYQSGETMLLIGDQEVSIASLIRVEDLNTDNNES
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcatgagcgtttccgaagtctacagtcaggccaacacaaccaccagtacgact
gaagcggtgatgggtaaagatgattttttgaccttgctgatcacacagttgaaaaaccag
gacccattgaatccttcggacagtaccgagttcacggcccaattggcacagttcagctca
cttgaacaacttcaaaatattaatgacgcattggccagtttcgaggtttatcaatccaca
gccaacaatattcaagcttcaaactttatcggtcaaacggttacggccgcgggggacacg
atttccgtatcaaatggcgcatccgattccttatccgttgccttggatgctcctgcccaa
accgtatatatccagatttacgatgcctatggggaatatgtgaccgacatcgaagctgga
agcctggatgccggcatgcataccatcgcctgggacgccaccgaccagtatggtgccgct
gtggaagacggcagatatacgttttctgttatggctgttgatggcgatgggaacagtgtc
tcctcaacgtcttatatcacggggcaggtaaccggtgttgactatcaaagcggcgaaacc
atgctgctgatcggtgaccaggaagtctccattgcctcactgattcgcgtcgaagatctc
aacaccgataataatgaatcatag
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