Desulfosarcina variabilis: Dvar_42780
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Entry
Dvar_42780 CDS
T10869
Name
(GenBank) Uup: ABC transporter, ATP-binding protein
KO
K15738
ABC transport system ATP-binding/permease protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_42780
Transporters [BR:
dvr02000
]
ABC transporters, eukaryotic type
Other subfamilies
Other ABC transporters
Dvar_42780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_CTD
ABC_tran_Xtn
AAA_16
MMR_HSR1
SMC_N
AAA_29
RsgA_GTPase
ATP-synt_ab
AAA_18
AAA_25
RNA_helicase
AAA_22
AAA_28
AAA_15
AAA_23
MeaB
NACHT
AAA_5
AAA_30
AAA_14
TsaE
AAA_33
DUF87
Rad17
ATPase_2
GTP_EFTU
DO-GTPase2
Viral_helicase1
DUF4349
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
XPS86260
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All DBs
Position
4801957..4803849
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AA seq
630 aa
AA seq
DB search
MAALITLRDISMHFGDAQILDHVNLTVAPGERICLVGRNGVGKSTLMNILAGRLAPDEGD
VMLAQNLVVGYLDQEVPKDFHGTVMSVICHRLGPQGRHLADYRRLCDEDEGDQAAAKKRL
ALQQTIDAENGWTIEQQVARTASQMNLDVDAEVGKFSAGMKRQVLLAAALCAQPDILLLD
EPTNHLDMPAIDRLESFLLKFGGTLILISHDRMLIRRLATRILEIDRGDLFSWDGNYDTY
LKQSQARLEAEANQNARFDKKLSAEEVWIRQGIKARRTRNEGRVRALARLREIRSSRRDR
MGRVRMSLEEAPRSGKIVIEATDLCFGFGQQNIVKNFNCTIMRGDRIGIIGPNGAGKSTL
IRLLLKNLSPLKGRIKRGTNLNVRYFDQLRDQLDENKTVQQNISDSDMLDVGGKRRHVIG
YLKDFLFSPQRSRTPVWVLSGGEKNRLLLAKLFSKPANVLVLDEPTNDLDVETLELLEEL
LLEFAGTVLLVSHDRAFINNVVTSTLVFEGSGRIQGYAGGYDDWLTQRPAPETNETPKRA
EKKSIAPVRPAPDAPKKLGYMEKRELDALPGRIESLELRQEELFQVMSQPDFYRQESDHI
AAVKSQLAQVEQELEQAFLRWEALDARDGR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactaattaccctgcgtgatatcagtatgcattttggcgatgcgcaaatactg
gatcacgtgaatctaaccgtggccccgggagagcgcatctgtctggtggggcgtaacggc
gtcgggaaatccaccctgatgaatattctggccggccgactggcaccggatgagggtgac
gtcatgcttgctcaaaaccttgtggtcggttacttggatcaggaggtgcccaaagacttt
cacgggacggtcatgtcggtcatttgccatcgattgggaccccaaggccggcatctggcc
gactatcggcggctttgtgacgaggatgagggtgatcaagcagcagccaaaaagcgtttg
gcccttcagcagacgatcgatgctgaaaatggctggaccattgagcaacaggtggcaagg
actgcctcgcaaatgaacttggatgtggatgcagaggtcggcaaattctcagccggcatg
aaaaggcaggtgcttctggctgcagccctttgcgcacagccggatattttgctgctcgat
gaacccaccaaccatttggatatgccggccatcgaccggttggagtcctttttgctcaaa
ttcggcggcacgctgatcctgatcagccatgaccgcatgctcatccggcgcctggccacg
cgtatcctggaaattgatcggggagaccttttttcctgggatggcaattatgacacgtac
ctgaaacaaagccaggcgcgtcttgaggcggaggccaatcaaaacgcacgctttgataaa
aagctgagcgccgaagaagtctggatcaggcagggcatcaaagcgcgccgcacacgtaac
gaaggtcgggtcagggcactggcgcgcttgcgtgagatccgcagtagccggcgcgatcgc
atgggcagggttcgcatgagcctggaggaggcgccccgtagcggtaaaattgtcattgaa
gcaacggacctttgctttgggtttggccagcagaacatcgtaaaaaattttaactgtacg
atcatgcggggggatcgcatagggatcatcggtcccaatggcgccggtaaatcaaccctg
attcgtctactgttgaaaaatttatcgccccttaaaggccgcatcaaacgtggcaccaac
ctcaatgtgcgttattttgaccaactgcgcgatcagctggacgagaacaagaccgtgcag
caaaatatcagcgacagcgatatgctggacgtaggggggaaacgccgccatgttatcggg
tacttaaaggatttcctgttttctccccagcggtcccgtacaccggtctgggtcctgtcc
ggcggtgaaaagaatcgtctgctgctggccaagcttttttcaaaaccggccaatgtgctg
gtgctggacgagccgaccaacgatctggatgtggaaaccctggaactgttggaggaactt
ttgttggaatttgccgggaccgtactgctggtcagccacgaccgggcctttatcaacaat
gtggtaaccagtacactggtgtttgaaggttccgggcggattcagggctatgccggtgga
tatgacgattggctgacgcagcgcccggcacccgagaccaatgagacacccaagcgggct
gaaaaaaaatccattgcgccggtcaggccggcgcctgatgcacccaaaaaactggggtat
atggaaaaacgcgaactggatgccttgcccggccgtatcgaatccctggaattacgccag
gaggaattgtttcaggtgatgtcgcagccggatttttaccgtcaggaaagtgatcatatc
gccgcagtaaaatcccaattggcccaggttgaacaggaactcgaacaggcctttttacgc
tgggaagcgttggacgcccgggacggaagatag
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