Desulfosarcina variabilis: Dvar_44090
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Entry
Dvar_44090 CDS
T10869
Name
(GenBank) XseB: exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dvar_44090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_44090
Enzymes [BR:
dvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Dvar_44090
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Dvar_44090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
RACo_linker
Acetyltransf_11
YihI
DUF5830
Motif
Other DBs
NCBI-ProteinID:
XPS86391
LinkDB
All DBs
Position
4948032..4948268
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AA seq
78 aa
AA seq
DB search
MSPKAKPSFEKSINDLEKIVKALESGDLPLEKALEKFEAGIKLSRYCNEMLDEAEKRVTL
LMADDTGQPVETPFNVES
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctaaggccaaaccgagttttgaaaaatcgatcaatgatctggaaaaaattgtc
aaggcattggaatcaggagaccttccgctggaaaaagcccttgaaaaatttgaagcgggg
atcaagctttcccgttactgcaacgagatgctggatgaagccgaaaaacgggtaaccctt
ctgatggcagacgataccggacagcctgtggaaacgccgtttaacgtggagtcctga
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