Desulfosarcina variabilis: Dvar_44100
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Entry
Dvar_44100 CDS
T10869
Name
(GenBank) IspA: geranyltranstransferase (Farnesyl-diphosphate synthase)
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00900
Terpenoid backbone biosynthesis
dvr01100
Metabolic pathways
dvr01110
Biosynthesis of secondary metabolites
Module
dvr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Dvar_44100
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dvr01006
]
Dvar_44100
Enzymes [BR:
dvr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Dvar_44100
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Dvar_44100
2.5.1.29 geranylgeranyl diphosphate synthase
Dvar_44100
Prenyltransferases [BR:
dvr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Dvar_44100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
XPS86392
LinkDB
All DBs
Position
4948271..4949164
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AA seq
297 aa
AA seq
DB search
MFDLKSYLAGVRQMVDNGLQQYLGDTASDVRIMQAMTYSVMAGGKRLRPVLCIAAAEAVG
GQRQHVLPLACAIEMIHTYSLIHDDLPAMDDDQTRRGKPTCHVKFDEATAILAGDALLTL
AFEILADTGSRKSADERTSWLTAISEVASAVGFKGMIEGQMRDITFEGTVLSEASLETLH
RLKTGRLIEISVGTGALLSGASAKQQAALKTYAQRIGLAFQVADDVLNIKGDPERLGKAT
GTDQQRGKNTYPGLLGLDGAEHLAGQLINNALKAIDTFDNKADSLRAIAHYVVERTR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacttgaaatcgtatttggccggtgtgcggcagatggtcgacaatgggctgcaa
cagtacctgggggacacagcctcggacgtacggatcatgcaggccatgacttactctgtc
atggccggtggcaaaagactgcgcccggtgttgtgcattgccgccgccgaagcggtcggt
ggtcaacgtcaacacgtcctgcccctggcctgtgccattgagatgatccatacctactca
ttgattcatgatgacttgccggccatggacgacgatcaaacgcgacgcggcaagccgacc
tgtcatgtcaagtttgatgaagcaacggcgattttggccggtgatgccctgctgaccctg
gctttcgagatcctggccgataccggcagccggaaatccgccgatgagcgcaccagctgg
cttacagccatctcggaagtggcatccgctgttggcttcaaggggatgatcgaaggtcag
atgcgcgatatcaccttcgagggaaccgtgctttccgaagccagtctggaaaccttgcat
cggctgaaaaccgggaggctaatcgagatttcggtgggtacaggtgcccttctgtccggt
gcatccgcaaagcagcaggcggccctgaaaacctatgcacagcgcatcggtctggctttt
caggtcgccgatgatgtgctgaacatcaaaggtgatcccgagcggttgggtaaagccacg
ggaacggatcagcagcgcggcaagaatacgtatccagggttgctgggccttgacggtgcc
gaacacttggccggccaactgattaacaatgccttgaaggcaatcgatacttttgataat
aaagcagattctttgcgggccattgcacattatgtcgttgaacggacccgataa
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