Desulfosarcina variabilis: Dvar_44160
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Entry
Dvar_44160 CDS
T10869
Name
(GenBank) DnaQ: DNA polymerase III, subunit epsilon -like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr03030
DNA replication
dvr03430
Mismatch repair
dvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dvar_44160
03430 Mismatch repair
Dvar_44160
03440 Homologous recombination
Dvar_44160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvr03032
]
Dvar_44160
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_44160
Enzymes [BR:
dvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dvar_44160
DNA replication proteins [BR:
dvr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dvar_44160
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dvar_44160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
PAS_7
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
PAS
PAS_10
PAS_9
DUF3849
PAS_8
Motif
Other DBs
NCBI-ProteinID:
XPS86398
LinkDB
All DBs
Position
complement(4955956..4958142)
Genome browser
AA seq
728 aa
AA seq
DB search
MKLNNKFWLFAIVCTVFTTAIAATLAILFWRQLLPVEQQLLIQIFKQQFWYFFSTGVFLF
AAFGFTLDWFFRFYILPLNQVIEETKVMNTVNPAHRLKIDGSREVRVLSELINVCGDQLQ
SAKHLIDQTVESAKSKIEAEKNILATIMAELTQGVLICDAAGRILLYNRQAQRVLEKAQD
AIGVSGQIETVVPEGFIGLKRSIYALIDEHLIQYALKDIQNKLNQKKENISSHFVMVTGD
QRQLRVETLPILDEDHGFAGFVLIFSDITHQLEYDGKFSQRFKEMAKTLRSSTASIRSII
DLMIQFPDMDVDQKKDFIGIISAETQSLSRILRSDLPEADRYARSRWPLSPILVTDFIAT
LKEEIEAVADLPIDVHDCDSRCMIKVDGYAMITAVEYILNCLKNECHAKCSRIRLSAPGN
LVQLDLIWQGEPIKIETLRRWSELSLTGTQKGYPLTLKEVLDHHHAEIWPHTPNQHNRGD
VCLRLFIPMVQSEAITPDIRQVTILPKGRPEFYDFDLFNQAGQTPEMENRLLTELVYTVF
DTETTGLDPRSGDEIISIGAIRIVNGRLLTTETVNQLVYPGRPVPIESTKIHGINDEMLA
GKPTIDKVLPFFHRFAKNTILVAHNAAFDMRMLQMKEKQTGLRFINPVLDTMHLSAVIHP
AHNNHNLDAIAQRLGVAISKRHDALGDAMATGEVFLKTIPLLNEKGIYTLKEALLASQRT
YYAKLKKY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaacaacaaattctggcttttcgccattgtctgtacagtcttcaccaccgcc
attgccgcaaccttagccattcttttctggcgacaactgttgcccgttgaacaacaactg
ttgattcaaattttcaagcagcagttctggtactttttcagcaccggtgtgtttttattt
gccgctttcggttttacgctggactggtttttccgcttttatatccttccgttaaatcaa
gtcattgaagaaaccaaagtcatgaacaccgttaatccggcccatcggctcaagatcgat
ggcagccgtgaggtcagggtgttgtccgagttgatcaacgtttgcggcgaccagttacaa
tctgccaaacatcttatcgatcagacggtggaatccgccaaatcgaaaatcgaggcggaa
aaaaacatcctggccacgatcatggcagaactgacccagggtgttttgatctgcgatgcg
gcaggtcggattttgctttacaacaggcaagcccaacgggtgcttgaaaaagcgcaagat
gccattggcgtgtcggggcagatcgaaacggtggtccctgaaggcttcatcggtttaaaa
cgatcgatctatgcgttgatcgatgaacatctgatccaatatgccctgaaggatattcaa
aacaaactgaaccaaaaaaaagaaaatatttcctctcattttgtcatggtgaccggtgat
cagcgtcaactccgcgtggaaacacttccgattttggatgaagatcatggctttgctggg
tttgtgctcattttttcggatatcacccatcaattggaatatgatggaaaattcagccag
cgtttcaaggagatggccaaaaccctgcgctcgtcgaccgcctccattcgatcgattatc
gatctgatgattcagtttcccgacatggacgtggaccaaaaaaaagattttataggtatc
atttctgctgaaacccagagtctgagccggatactgagaagcgatctaccagaggcagac
cgctatgcccgatctcgctggccgttatctcccattttagtcaccgatttcattgccacg
ctaaaggaggaaattgaagcggtcgcggatctgcccattgacgtgcacgactgtgattcc
cgctgcatgattaaagtggacggctacgcaatgatcactgccgttgaatatatcctcaat
tgcctgaaaaatgagtgtcatgcgaaatgcagccgtatccgtttgagcgcgccgggaaat
cttgtccaattggatctcatctggcagggtgagccaatcaaaatcgagaccttaaggcgc
tggagcgagctttccttgaccggcacccaaaaaggatatccattaacgctcaaagaggtg
ctggatcaccaccatgccgaaatctggccccacacgccgaatcaacacaatcgtggggac
gtttgcctgcgtctctttatccccatggtgcaatctgaagctattacgccggatatacgc
caagtgacgattctacccaagggccgaccggagttttatgatttcgaccttttcaaccag
gccgggcaaaccccggaaatggaaaaccgtttgcttacggaactcgtttatacggtgttt
gatacggaaacgaccggcctggatccacgaagtggagatgaaatcatctcgattggcgcc
atccgtattgtcaacggccggctgctgactacagagacggtcaaccaacttgtgtatccg
ggtcgaccggtgcccatcgaatccaccaagattcacggcatcaacgatgagatgttggcg
ggaaagcctacaattgataaggttttgccttttttccatcgatttgctaaaaacacgatc
ctggtggcgcacaacgctgcctttgatatgcgcatgctgcaaatgaaagaaaaacaaacc
ggcctgcgattcattaatccggtactggacaccatgcatctgtcggcggttatccatccc
gcccacaataaccataatctggatgccattgcccagcggctgggcgttgccatcagcaaa
cggcacgacgcccttggggatgccatggccaccggtgaggtatttttaaagacgataccg
cttttaaatgaaaaaggcatctatacattaaaagaagcgctgcttgcctcacagcgaacc
tactacgccaaactcaagaagtattga
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