Desulfosarcina variabilis: Dvar_45300
Help
Entry
Dvar_45300 CDS
T10869
Name
(GenBank) MutS: DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
dvr Desulfosarcina variabilis
Pathway
dvr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dvar_45300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_45300
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Dvar_45300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
nSTAND_NTPase5
AAA_14
RCC_reductase
AAA_22
ABC_tran
AAA_29
nSTAND3
AAA_23
Rad17
Motif
Other DBs
NCBI-ProteinID:
XPS86512
LinkDB
All DBs
Position
complement(5087262..5089889)
Genome browser
AA seq
875 aa
AA seq
DB search
MTSVKTTPMLQQYLSIKERYPDVLLFYRMGDFYEMFFEDAQVASRVLEITLTSRNKNQES
PVPMCGVPYRAAQGYISRLIDNGYKVAICDQVEDPKAAKGLVKREVVRVVTPGMIIEDEL
LDAKANNFILAVACHNQLVGIASLDISTGMFRLTETEDAPAVIDEIMRLAPREVLIAENL
KAEDTFSVLFDSLTGFAVTSLDTKVFEFARSRQRLLDQFDILSLDGFGCETLKAAVSAAG
ALIYYVSETQRQKIEHLDGMQTYSLGQFLIVDDQSRRNLELSANIRLGNRQGTLLSILDQ
SVTAMGGRLLSDWLRYPLLEPDPIEGRYNAVAEAVEKIQIRKDLRNCLKSVQDIERLGSK
IAMGHANARDLTSLKKSIATIPELLGILDGFSAELYRYGQSTTPLTELAENIHRAIREDA
PPVISDGGMICEGFDDELDELIRISRDGKGWLAELETKEREATGINTLKVRFNKVFGYYI
EVPRSQSKSVPDHYVRKQTLVNAERYITDDLKHFESRVLNAQEQRASLELKIFSAIVGEV
KAHHNDILSLARFIAQVDCLSTFADVAQTNGYCRPTLNTEGVLDIRDGRHPVVEKLITAE
RFVPNSIRLDNQDDQVIIITGPNMAGKSTVLRQVALMTIMAQMGCFVPAKKAEIAITDRI
FTRVGALDNLSAGQSTFMVEMQETANILNNATANSLVIMDEIGRGTSTYDGLSIAWAVAE
HLHNLNGMGTRTLFATHYHELTELEQQLERVKNYNIAVKEWNDTIIFLRKLVEGGTNRSY
GIQVARLAGIPEPVIKRSKAILAQIEDGSHPKAVEKKKVKDRSKKKDGHVQLALFSPMER
KLVETLQMLDLSRMTPMEAMNLLNELQNKAQTVVY
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgtaaaaacgactccaatgcttcaacaatacctctccattaaggagcggtat
cctgacgttcttttgttttatcgcatgggcgatttctatgaaatgtttttcgaagacgca
caggtcgcgtcccgggtgcttgaaatcaccctgacctcgcgcaataaaaaccaggaatcg
cctgtccccatgtgcggtgtgccctaccgcgcagcccaaggctacatttcccggttgatt
gacaatggttacaaagtggccatttgcgatcaggtcgaagaccccaaagccgctaaagga
ctggtcaaaagggaagtggtgcgggtagtgacgccgggtatgatcattgaagatgaactg
cttgatgccaaagccaacaattttattttggcggtggcctgtcacaaccagttggtgggg
attgccagcctggatatttctaccggcatgtttcgcttgactgagacggaggatgctccg
gccgtcatcgatgagatcatgcggttagccccaagagaagttctgatcgcggaaaatctt
aaggctgaggatacgttttccgtcctttttgacagcttgaccggtttcgcggttacctcg
ttggatactaaggtttttgaatttgcgcggagccgtcagcggctgctggatcagtttgac
attttgtctctcgacggttttgggtgtgaaaccctgaaagccgcggtcagcgccgccggg
gcactgatttattatgtgagtgaaacccagcggcagaagatcgaacacctggatggaatg
caaacgtattctttggggcaatttctaattgttgacgatcagagccgtcgcaacctggaa
ttgtcggcaaacatacgcttgggcaatcgtcagggaaccttattgtcgattttggaccag
agtgtcacggcaatgggcggacgacttctaagcgactggttgcgctatcccttgcttgaa
ccagacccgatcgaggggcgctacaatgctgttgccgaggccgtggaaaagatccaaatt
cgcaaggatctgcgaaactgtctgaagtcggtacaggatattgaacggctgggcagcaaa
atcgccatggggcatgccaatgctcgggatctcacatccctgaaaaaatcgatcgcgaca
atacccgagcttttgggcattcttgacggcttttcggcggagctgtaccgttacggtcaa
tcgacaaccccattaactgaactggccgagaacattcatcgtgcgattcgcgaggatgcg
ccaccggtgatcagcgatggtggaatgatttgcgaaggatttgatgacgaactagatgaa
ttgatccgaatcagtcgtgacggcaaaggttggcttgccgagcttgaaaccaaagaacgc
gaggcgacaggcatcaacaccctcaaggtgcgtttcaacaaagtttttggatattacatc
gaggtgccgcgcagccaaagcaaatccgttcctgatcattatgtgcgcaagcaaaccctg
gtcaatgcggagcgctatattaccgacgaccttaaacattttgaatccagggtgctcaac
gcgcaggaacagcgcgccagtcttgaattaaaaatttttagcgccattgttggtgaggtt
aaagcacatcacaacgacattttgtccctggcccggttcattgcccaggtggattgcctg
agcacattcgctgatgtggcgcagaccaatggctattgccggccgacattgaatactgag
ggcgtgctggatatccgcgacggtcgtcacccggtggtggaaaagctgatcaccgccgaa
cgatttgtgcccaattcgatccgattggacaaccaggacgatcaggtgatcatcattacc
gggccgaacatggccggcaaatcaaccgttttgcgccaagtggcgctcatgaccattatg
gcgcagatgggctgttttgtgcctgccaagaaggctgagattgccatcaccgaccgtatt
tttacacgcgttggcgccttggacaacctgtctgccgggcaaagtacgtttatggtggaa
atgcaggaaacggcaaatatcctcaacaatgcgacggccaacagcctggttatcatggat
gaaatcgggcgaggaacgtctacctatgatggtttaagtattgcctgggccgtggccgaa
cacctgcacaatttaaacggcatgggcacgcgaaccttgtttgccacgcactatcatgag
ttgaccgagttagaacaacaactcgaacgggtgaaaaattacaacattgcggtcaaggag
tggaacgacacgatcatctttctcaggaaattggttgaaggcggcaccaatagaagctat
ggaattcaagttgcccgactggccggcataccggagccggtgattaaacgatccaaagcc
attttagcccagatcgaggacggatcgcatcccaaggccgttgaaaaaaagaaagtaaag
gaccgatccaaaaaaaaagacggccatgtgcagttggccttgtttagccccatggaacga
aaattggtagagacattgcagatgttggatttgagtcgcatgacgcccatggaggccatg
aatttattgaatgaattgcaaaataaggcacaaacggtcgtttactga
DBGET
integrated database retrieval system
