Desulfosarcina variabilis: Dvar_45340
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Entry
Dvar_45340 CDS
T10869
Name
(GenBank) RimK-like ATP-grasp domain protein
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvr03009
]
Dvar_45340
Ribosome biogenesis [BR:
dvr03009
]
Prokaryotic type
ribosomal protein modification factors
Dvar_45340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
GSH-S_ATP
ATPgrasp_YheCD
ATPgrasp_ST
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
XPS86516
LinkDB
All DBs
Position
complement(5092516..5093295)
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AA seq
259 aa
AA seq
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MALQVLALEARLRACRNVRTIGVRPNFTDYNPEEVALIRRAEKIYYPTAFYADLFDAMGK
ATFPSYHTYKCVQDKIKQSALFQLVGLPHPKTRVFYGKRQQLKIKRHFQYPFIAKEPRGS
AMGRGVFLIENDADLEHYTQGRHVCYIQQYLTIDRDIRAVVIGSQVAHAYWRIAKKGEFR
TNVARGGRISLEPIPKTAMALAIHAAKTCGWDDVGLDICYFDGQYMILEANMKYGREGFR
AAGIDYYAMMERMIDEGYI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcaggtcctggcgctggaagcgcgcttgcgcgcatgccgcaacgtgcgcacc
atcggtgtgcgtcccaactttacggactacaatccagaagaagtggcgctgatccgacgt
gcggaaaaaatttattatcccacggcgttttatgcagacctgttcgatgccatgggaaag
gcgacctttcccagttatcacacatataaatgcgttcaagataagatcaaacaaagtgcg
ctgtttcagttggtcggattaccccatcccaaaacgcgtgtattttacggcaaacgccag
caattgaaaatcaaacggcatttccaatatccgtttatcgccaaagagccgcgtgggtct
gccatggggcgaggggtttttctgatcgaaaacgatgccgaccttgaacattacacccag
ggtcggcatgtctgctacattcagcaatacctgactattgaccgtgatatccgggccgtg
gtgatcggcagtcaggtggcccatgcctattggcggattgccaaaaaaggagaattccga
accaatgtggccagaggtgggcgcatcagtctggaaccgataccaaagacggccatggcc
cttgccattcacgcagccaaaacctgcgggtgggatgatgtggggctggatatctgttat
tttgatggacaatacatgatcctggaggccaatatgaagtatggtcgtgaaggattcagg
gccgccgggattgattattatgccatgatggagcgaatgattgatgaaggatatatttga
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