Desulfosarcina variabilis: Dvar_46590
Help
Entry
Dvar_46590 CDS
T10869
Name
(GenBank) DapF: diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00300
Lysine biosynthesis
dvr00470
D-Amino acid metabolism
dvr01100
Metabolic pathways
dvr01110
Biosynthesis of secondary metabolites
dvr01120
Microbial metabolism in diverse environments
dvr01230
Biosynthesis of amino acids
Module
dvr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dvar_46590
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dvar_46590
Enzymes [BR:
dvr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Dvar_46590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XPS86641
LinkDB
All DBs
Position
complement(5212468..5213295)
Genome browser
AA seq
275 aa
AA seq
DB search
MKSIPFYKMSGSGNDFIIIDNRELWVPDAQLPDLIKGACRRKLSVGADGLILIEPSCVVD
FKWRFFNADGSVAEMCGNGARCAARFAFLHGIAGRRMAFETLAGIIHAEVGEDAVKIRMT
DPVDLRADFDLYLDDNPVRVSSINTGVPHVVMVVPDVEQTDVVSMGRRIRYHQEFAPAGT
NANFVSIDSSNKISIRTYERGVEDETLACGTGNVAAALILSHTQGLSSPVCLTTRSGSTL
TVHFSRQANRYQDVYLEGDARVIYSAELWEDAWRT
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgatccctttttataagatgagcggtagcggcaatgatttcatcattatcgac
aaccgggagctatgggtgcctgatgcgcagctgcccgatttgatcaaaggggcctgccgc
cgcaaactgtcggtcggtgccgacggactgattctgattgaaccgtcgtgcgtggtggat
ttcaaatggcggttcttcaacgctgatggcagtgtggcggaaatgtgcggcaacggggcg
cggtgtgcggcacgctttgcatttttgcatggcattgccggtcggcggatggcctttgaa
acgctggcggggatcatccacgccgaagtgggcgaggatgcggtcaagatccgtatgacc
gatccggtggaccttcgcgctgactttgatctatacctggatgacaatccggtgcgggtg
agcagcatcaataccggcgtgccccatgtggtgatggtggtccctgacgtcgagcagacg
gatgtggtgagcatgggacgccgcatccgctatcatcaggaatttgcaccggcaggcacc
aacgccaattttgtctccatcgatagcagtaataagatatcgatccgcacctatgagcgc
ggggtggaagacgaaaccctggcctgcggcacgggcaatgtggccgcggcgttgatcctg
tcacacacccaaggactatcgtcgccggtttgcctgaccacgcgcagcgggtcaaccctg
accgtccatttcagccggcaggcaaatcgatatcaggatgtctatctggaaggcgatgcg
cgggtgatttacagcgctgagttgtgggaggatgcatggcgcacatga
DBGET
integrated database retrieval system