Desulfosarcina variabilis: Dvar_46980
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Entry
Dvar_46980 CDS
T10869
Name
(GenBank) PotD2: spermidine/putrescine ABC transporter, periplasmic binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dvar_46980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_46980
Transporters [BR:
dvr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
Dvar_46980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
XPS86680
LinkDB
All DBs
Position
complement(5260101..5261147)
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AA seq
348 aa
AA seq
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MRKIGLFVLVLLVLGPITASAEELRVYTWSEYMDEEKMTADFEAAYGIKVRLDIYENNEE
MVAKLQAGGAGQYDIIVPSDYIMPVLINQKLIQPLDHDKLPNLKNLKLRFRQIGYDPGNR
YAVAYQWGTVGLMYRKDRVDAAAVGSWSLLFDPNKQPGPFWLVDGMREMMGIALVYLGKD
FNSTRPADLKAAADLLVATKQSKNCLGFKGGVGGKNDVVAGTAVAAIVYNGDAIQSISED
PTHLGFVIPAEGSEIWLDLMAIPSRAPHPDAAHKWINWILSAKVGAELSNYNQYATPNAA
AEAFINKEDLNNPGIYPTPAIMEKLHFTKDLGKGNRIMDEAWTRAKSH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaataggactgtttgtgttggttttgctggtacttggccccataactgccagt
gcagaggaactcagagtctacacctggtcggaatatatggatgaggaaaagatgacggcc
gacttcgaggccgcctatggcatcaaagtccggcttgacatctatgaaaataacgaggaa
atggtagcgaaattacaggccggcggtgcaggccagtacgatattatcgtgccgtccgac
tatatcatgccggtgttgatcaatcagaagctcatccagcccctggatcatgacaagctg
cccaatctgaaaaatctcaagctccgctttcgtcagatcggatacgatccgggcaaccgt
tatgcggtggcctaccagtggggcacggtggggctcatgtaccgcaaggaccgggtcgat
gctgcagcggtgggcagctggtcgctgctttttgaccccaacaagcaacccgggcccttc
tggctggtcgatggcatgcgggagatgatgggcattgccctggtttacctgggcaaggat
ttcaacagcacccgtcccgcggacctcaaggctgccgccgatctgttggtggccaccaag
caaagcaaaaactgtctggggttcaagggcggggtcggtggaaagaacgacgtggtggcc
gggacggccgtggctgccattgtgtacaacggggatgccattcagtcgatcagcgaggat
cctacgcatctggggtttgtcattccggccgagggtagtgaaatctggctggatttaatg
gccattcccagccgtgcgccgcacccggatgcggcccataaatggatcaactggattctg
tccgccaaagtgggggccgagctgtccaattacaaccagtacgccacacccaacgctgcc
gccgaggcatttatcaacaaggaagacctgaacaatccaggcatctatcccaccccggcg
atcatggaaaaactgcatttcaccaaggatctggggaagggcaaccggattatggatgag
gcctggacccgagccaagtctcattaa
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