Desulfosarcina variabilis: Dvar_47690
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Entry
Dvar_47690 CDS
T10869
Name
(GenBank) GyrA: DNA gyrase, subunit alpha
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvr03032
]
Dvar_47690
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_47690
Enzymes [BR:
dvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dvar_47690
DNA replication proteins [BR:
dvr03032
]
Prokaryotic type
DNA Topoisomerases
Dvar_47690
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dvar_47690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
XPS86751
LinkDB
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Position
complement(5330509..5333007)
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AA seq
832 aa
AA seq
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MTDISTEETPSGPEISIETEMKRSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMRELK
NDYNKPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSMRYPLVDGQGNFGSIDGDS
AAAMRYTEVRMTKLAQEMLEDLDKETVNMVPNYDESLDEPSVLPAKFPALLVNGSSGIAV
GMATNIPPHNLSEVIEGIKALIDNPDITWTELMAHIPGPDFPTGGIIHGIHGIRDAYATG
RGIVRTRAVVNIEEDQKTGQETIAVTEIPYQVNKARLCEKIAELMKHKVIEGLRYVRDES
DRRGMRIAMGVKKDHMAGVIVNQLYKHTQMETSFGIILLAVVKNRPQVLNLKQILENFVL
HRKEIVIRRTRYDLNKAEARAHILEGLKVALDNLDAVVKLIRESKTPPEAKDRLMQTFGL
TAIQAQAILDMRLQRLTGLERDKIVEEYEAVLKDIARYKEILGSEQLVLGIIKNELDILK
GEYGDVRRTQIMADTRELTIEDMIAEEDMVVTITNTGYIKRNPITLYQSQRRGGKGKTAM
GTKEEDYVTHLFVASTHHYFLFFTNWGKVYWCKVYDIPQAGRQSRGKAIVNLLEFSSGER
MTAVLAVPAFEPGLNVLMATRKATVKKTDLMAFSRPRSGGIIAISLAEGDELIAVKLSDG
TQNVFLGSATGKSIRFHESDIRASGRTARGVRGMNLAPEDRVVGMEVMQHGQTLFAVTEN
GYGKRTSIDEYPIHKRGGKGVITIKTNERNGQVVGIILVNDKDDLMLVTDRGKLIRMPVS
GISVISRNTQGVRLIVIEAGERVVSAARLAEAEEQTSDEADGDESLPLAPEE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacagacatttcaaccgaagaaaccccgtccggccctgaaatcagtattgagactgag
atgaaacgctcatatctcgattatgccatgagcgtgatcatcggacgggcgcttcccgat
gtgcgtgatggactcaaaccggttcaccgtcgtgtcctctttgccatgcgggagctgaaa
aacgattacaataagccctacaagaaatcagcccgcatcgtgggggacgtgatcggtaaa
taccacccccatggtgataccgcggtctacgatacgattgtccgtatggcccaggatttt
tccatgcgctatccacttgtggacggccaggggaactttggttccatcgacggtgactcg
gccgcggccatgcgatataccgaagtgcgcatgacgaagctggcccaggaaatgctcgag
gacctggacaaagaaaccgttaacatggtccccaactacgatgagagtttggacgagcca
tcggtgctgccggccaagtttccggcccttctggtcaacggttcgtccgggatcgccgtg
ggcatggccaccaatattccgcctcataatctgtccgaggtgatcgaaggcatcaaggcc
ctgatcgacaacccggacattacctggactgagctcatggcgcacatccccggcccggat
tttcccaccgggggtattatccacggcattcatggaattcgcgatgcctatgcgacgggg
cgcggaattgtgcgcacccgcgcggtggtgaacattgaggaggaccaaaaaacgggacag
gaaaccattgcggtaaccgagattccctatcaggtgaacaaggcccgattgtgcgagaaa
atcgccgagttgatgaagcataaagtgatcgaggggcttcgctatgtccgggatgagtcc
gaccggcgcggcatgcgcatcgccatgggggtcaaaaaggaccatatggccggcgtgatt
gtcaaccagctgtacaaacacacccagatggaaaccagcttcgggattatcctgctggcc
gtggtcaagaatcggccgcaggtactcaatctgaaacagatcctggagaatttcgtcctg
caccgcaaagagattgtcatccggcgcacccgctatgacctgaacaaggccgaagcccgg
gcccatatcctggaaggactcaaagtcgctttggacaatctggatgccgtggtcaagctg
atccgggagtccaaaactcccccggaagccaaggaccggctgatgcagacctttggtctg
acggccattcaggcccaggccattttggatatgcgtctgcagcggctcaccggcctggaa
cgcgacaaaattgtggaagagtacgaggcggtgctcaaggatatcgcccggtataaagaa
attttgggcagtgaacaactggtgctgggaattatcaaaaacgagctggacatcctcaag
ggtgaatacggtgacgtgcgccgaactcagatcatggccgacacccgtgagctgaccatc
gaggatatgattgccgaagaggatatggtggtcactatcaccaacaccggatatatcaaa
cgcaatcccatcaccttgtaccagagtcagcggcggggcggaaaaggcaagaccgccatg
ggcaccaaagaagaggattacgtgacgcatctgtttgtggcgtcgacccaccactatttc
ctcttttttaccaactggggcaaggtgtattggtgcaaagtctatgatatcccccaggcc
ggccgccagagccgcggcaaggccattgtcaacctgctggaattttccagtggcgaacgc
atgaccgctgtgctggcggtgccggcctttgaaccgggcctcaatgtgctcatggccacc
cgcaaggcaacggtcaaaaagacagatttgatggccttcagccggccgcgcagcggtggc
atcatcgccatcagcctggccgagggcgatgaactgattgcagtgaaactctccgatggc
acccagaatgtctttctgggcagcgccacgggcaaatcgatccgtttccatgaatcggac
attcgggccagtggccgcacggcgcgtggggtaagggggatgaacctcgccccggaagac
cgcgtggtgggcatggaggtcatgcagcacggacagaccctgtttgccgtaaccgagaac
gggtatggcaagcgcacctccattgatgagtatccgattcacaagcgcggcggcaagggc
gtgattaccattaaaaccaacgaacgcaatggacaggtagtgggcattattctggtcaac
gacaaggatgacctgatgctcgtgaccgatcggggaaagttgatccgtatgccggtttca
ggcatttcggtgatcagccgcaacacccagggggtgcgtttgattgtcattgaagccggc
gagcgggtggtcagtgccgcccgtctggccgaagcagaagagcaaaccagcgacgaggcg
gacggggatgaatccttgcccctggcgcctgaggaataa
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