Desulfosarcina variabilis: Dvar_47970
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Entry
Dvar_47970 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_47970
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_47970
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
rhaM
Motif
Other DBs
NCBI-ProteinID:
XPS86779
LinkDB
All DBs
Position
complement(5360718..5362682)
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AA seq
654 aa
AA seq
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MKKLKDIVVTGKSGAPGLETKPLKTVIEMDDFIPVAPSDSVLDVLKTQAAVDFRGENDLD
PGVDSVYLNGFDSTRFVTALDGATIQKTGGRKSSNIVDYSMLPAFLIEKIEILPGPHSAM
YDGKAIGGVLNFISRAPERRDSLKPDVGLSSSYSSYDTWNSTASLEGAISAFTYDFAYQH
YETDGYLRNSAMNKDIFYGRLGFVLPYDGFITLSVSHSDVDREKPVRNPAYDGSDYDPDY
PTVINDSTSSVFDARQQSTWDSTSDSYRLNYEQSLPTGRLDITGFYSEDNRLRSYYEYTD
DTRTTLETQKTEMDTDWWTQGGKITDAIDWTPSQTTTVGYDLVQMFDDQPEDRSKRINKQ
GFFLQHRWAIVPSLEVTVGARYEDLKIWIRDNVTDTLDPPRHFSDLMPKSFLTWKMDQLT
PWLRDTSLSAGVSKIWHAPDAHGTYNARGRPIGREMEPEHGMGYDLILQRRLWRDIALQI
DYSLYMIDDYMSGGDNLEGTVERNGVGLQIGGHLTDDLSFYASWAWQDFGYDGDDAGGHE
VVDQRAENRIGAGLRYNLFENTMLLLDYSYQDDEVTEDWTDNPDGTSTFNGYTDIPAYNL
FDFGVQQTLFQNAGWFHDGVLSLYVKNLFDEEYSNAKGWPAIDRTFGASFRVKF
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaattgaaagatattgtggttacgggaaaaagtggggcaccgggccttgaaacg
aagcctctcaaaaccgttatcgagatggacgatttcattcccgtggcgccgtccgacagt
gtcctggatgtgctcaaaacccaggcagccgtcgatttccggggtgaaaacgaccttgat
ccgggcgtcgacagcgtctacctgaatggcttcgatagcacacgcttcgtgacggcgctg
gacggtgccaccattcagaaaaccggcgggcgcaaatccagtaatattgtggattattcg
atgctgccggcctttttgatcgaaaaaatagagatccttccggggccccactcggccatg
tatgacggcaaggccatcggcggcgtgctgaatttcataagccgggcccccgagcgtcgg
gacagcctgaagcccgatgtcggcttgagcagcagctacagctcctatgacacatggaac
agcaccgcttccctggagggggcgatatctgcgtttacctatgattttgcctaccagcat
tacgaaaccgatgggtatttgcgtaacagcgccatgaataaggatatcttctacggccgc
cttggcttcgttttgccctacgatggtttcatcaccctgagtgtttcccattcggatgtc
gatcgagaaaagcccgtgcgtaaccccgcctacgacggcagtgattacgacccggactac
cccaccgtgatcaatgacagcaccagcagtgtgttcgacgccaggcaacaatccacatgg
gacagcacttccgatagttaccgcctcaactacgagcaatccctgcccacaggccggctc
gacatcaccggtttctatagtgaggataaccgcctgcgtagctattatgaatatactgat
gatactagaaccacgctcgaaacgcaaaaaaccgaaatggacaccgactggtggacccag
ggaggcaaaatcacggatgccatcgactggactcccagtcagaccaccaccgtgggttat
gacctcgtccagatgttcgacgaccagccagaggaccgttccaagcgcatcaacaagcag
ggtttcttccttcagcaccggtgggccattgtgccgtcgctggaggtcacggtgggggca
cgctatgaggatttgaagatctggatacgtgacaatgtaaccgacaccttggatccgccc
cgccatttttccgacctgatgcccaaatccttcctcacctggaaaatggaccagttgaca
ccctggctgcgggacacctcgctgtccgccggcgtcagcaagatctggcacgcccccgac
gcccacggcacctacaacgcccggggacgacccattggacgtgagatggaacccgagcac
ggcatgggctatgacctgattcttcagcggcgattgtggcgggatatcgcgctccagatc
gactactccctttatatgatcgatgattatatgtccggcggcgacaatctggaaggcacg
gtggaacgtaatggcgtggggctgcagattggcggccatctgaccgacgacctctctttc
tatgcctcctgggcctggcaggatttcggatatgacggtgacgatgccggtggccatgaa
gttgtggaccagcgggccgaaaaccggatcggggccgggctgcgctataacctgtttgag
aacaccatgctgctgctcgactattcttaccaggacgacgaggttactgaagattggacg
gataatcctgatggtacttccacattcaacggatacaccgatatcccggcctataatctg
ttcgacttcggcgtacagcaaacccttttccaaaatgccggctggtttcatgacggcgtg
ttgagcctttatgtcaagaatctgtttgacgaagaatactcaaacgccaaaggctggccg
gccattgaccggactttcggcgcttctttcagggtaaagttctga
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