Desulfosarcina variabilis: Dvar_48000
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Entry
Dvar_48000 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_48000
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_48000
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MtrB_PioB
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
XPS86782
LinkDB
All DBs
Position
complement(5366052..5368169)
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AA seq
705 aa
AA seq
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MWVSVVFVIGVIGGSPAWSQQADADSETARQLEKDEKTDSESVKKLEDIVVTGKSGMPGF
EIRPQKTVIDVDDFSSIGGDKSNIQDLLKTQAAVDFRGTDQDPGVDSIFLRGFDAKRFVA
AIDSVTVQKTGGRKSSNIVDYALLPTFMIKEIEILPGPHSALFDSKSIGGVINMVTRRPE
RHETAKPDVSLTSSYSSYATVNMVGTGSGSIKNFTYDAAYRHYQTNGYLRHSETDIETVY
GRVGYLLPANGFVTVSASSSDTDRHVAVNNPGGEYGDYDSSYPATEDGAFDPYQEPTWNG
ESYHYRMDLEQPTPIGKFKIGAYTGKDNRQRAYYEDMGDTEPSLMNTDWWQKGGKLQDEI
EWSEHHKTTIGFDMAKLYDEGLDDDKTERINKKGGYLQHRWGILDNVDLTLGGRYEAVKI
WVSNESRGELHNSSFDRYIEREWDEFVPKFFSTWRMDDMAAWLRDSSLSAGISKIWRAPD
YHGDYNPQGRPAGAFLEPEHGMGYDLIFNRRLFNDIQFSIDFSFYDINDFIATNSAYDTA
SDYSDYKINLDEVYRYGVDVELNGHLMDKLSFYLAYSWQDFDNQGDEKAAQTELDQRAKH
RLSAGLRYELFENTKLMLDYRYQSDEVTQDYTELENDEYYFQEVEIDAYHTFDAGIEQVL
WKQKGPIEEASLNLYVKNLLNATYYETSGFPAADRTVGATLRLSF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcagtgttgtttttgtaattggtgtgattggcggcagccccgcgtggtctcag
caggcggatgcggattccgaaaccgccagacaattggaaaaggatgagaaaactgattcg
gagtcggtcaagaaactggaagatattgtagtcacgggaaaaagcggaatgccggggttc
gagattcgcccccaaaaaaccgttattgacgtcgatgacttttcgtctatcggtggcgat
aaaagcaatattcaggatctgctcaagacccaggccgccgtggattttcgcggaacggac
caggatcccggggttgattcaatttttctgcggggctttgatgccaagcgttttgtggcc
gccatcgactcggtaacggttcaaaaaacaggcgggcgaaaatcgagcaatattgtcgat
tatgcactgctgcccacgtttatgatcaaagagatcgaaatccttcccggccctcactca
gccttatttgacagcaagagtatcggcggggtgatcaacatggtcacccgacggcccgag
cgccacgagaccgcgaaacccgatgtgtctctgacttcaagctatagttcctatgcgacg
gtcaatatggttggcaccgggagcggttccataaagaattttacctatgatgccgcctac
cgccactatcagaccaacggttacctgcgacacagcgaaactgatattgaaaccgtatac
ggccgtgtgggctatctcttgcccgccaatgggtttgtgaccgtcagcgcgtctagtagt
gataccgacaggcatgtggcggtcaacaatcctgggggagaatatggcgattatgacagc
agctatccggccacggaagatggtgcctttgacccgtatcaggagccgacctggaatggg
gagtcctaccactaccgaatggaccttgagcagcccacccccatcggcaaatttaaaata
ggcgcctacactggcaaagacaatcgccaacgggcctactatgaagacatgggggacacc
gagcccagcctgatgaatacggactggtggcaaaaaggcggcaaacttcaggatgagatc
gagtggtcggagcatcacaagaccaccattggtttcgacatggcaaaactctatgatgag
gggctcgatgatgacaagacggaacgcatcaacaaaaagggcggttaccttcaacatcgc
tgggggatcctggacaatgtcgacctgaccttaggagggcgctacgaagccgtcaagatc
tgggttagcaatgaatcccgaggagagcttcacaatagcagcttcgatcgctacatcgag
cgtgaatgggatgagtttgtgccgaaattcttctccacctggcgaatggacgacatggcc
gcctggctgcgtgacagctcgctttcggctggcatcagcaagatctggcgcgctccggat
taccatggtgattacaatccccagggccgaccggctggtgcgtttctggaaccggagcac
gggatgggctacgatctgattttcaaccgccgcctgttcaatgacatccagttctccatt
gacttctccttttacgatatcaatgactttattgccaccaacagcgcttatgacacagcc
tccgattacagtgattacaagatcaatttggacgaggtttaccgctatggggtggatgtt
gagttaaatggtcacctcatggacaaactttccttttatctggcctactcgtggcaggat
tttgacaaccagggagatgaaaaagcggctcaaaccgagctagaccagcgggccaaacac
cgattaagcgccggtctgcgatacgagcttttcgaaaataccaagctgatgctggactac
cgctatcaaagcgacgaagtcacacaggactacacagaacttgaaaacgatgaatattat
tttcaagaggtggaaattgatgcctaccatacctttgatgccggcatcgagcaggtcctg
tggaagcaaaaagggccgattgaagaggccagcttgaatctttatgtaaaaaacctgctc
aatgcgacctattacgaaacctccggttttccggctgctgatcgcacggtgggcgcgaca
ttgcgcctgagcttttag
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