Desulfosarcina variabilis: Dvar_48140
Help
Entry
Dvar_48140 CDS
T10869
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_48140
Transporters [BR:
dvr02000
]
Other transporters
Pores ion channels [TC:
1
]
Dvar_48140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
XPS86796
LinkDB
All DBs
Position
complement(5384466..5386379)
Genome browser
AA seq
637 aa
AA seq
DB search
MRLRFLLTPMGWMFLVMLLLPWSMAAAQESHGHGHGHAAQSKDATAMDSIVVTAERIDAF
IEKNPQQVVILGLEEIEKRNLLSVEEALNTMAGVDVKKSSGIGSRISIRGSGKAGGVLVL
LNGRPLNSSQYGGADISSIPIDIVKSITVFKPPVPVWLGAGASEGAIVITTRDSVDARDD
ESKHVTRIRGAGGSYGQVEGTVSHRYSMKKGGAMVTASGKHRDGKRTNSDRDSGDLSLHW
DRELGAGKRVELNGRYYLSEYGSAGPEDNPTPDARQSYQKGSLDSRLSGIIGSTGDYALN
LYGDLIDLKDESQSELVSTLDNQKYGLKAENNWTDAEEKWGLQLSGILERDDVDHTLSGT
HHRTTAGLGAQADRNWQAFSVTLGARGDYTSDFDVNPGFSGGLRYSLAKHWAIKANAGYT
VNIPNFGQLYQPSHGSIDQSRGNPDLDKEKIWSYDLSTEFRKGKSHSFLVTLFRSDVSDP
ITYERGDDLIYRPVNANRSWRQGVEAAWKYALDLGLTMDASAVVQDSEIEETGNELTYTP
RVKLKLALLYTLKSVGTRLETTVRYRSKQYSESQNREDQSLDDYTTVDFKAIQPFKIKKL
AVEWFVNLDNLFDKRYEVHHGYPDDGFRFLTGLNLTF
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcgttttttattgacaccgatggggtggatgtttttagtcatgctattgctt
ccctggagcatggctgccgcccaggagagtcacggtcacggacatggccatgccgcccaa
tcgaaagatgcaacggcgatggacagcatcgtggtgacagctgaacggatcgatgccttc
atcgaaaagaatcctcagcaggtggttatattggggcttgaggaaatcgaaaaacggaat
ctgctcagtgtggaagaggcgctgaataccatggccggcgtagacgtgaaaaaaagctcg
ggcatcggctcgcggatttccattcgtggctccggaaaagccggcggtgttctggtgctg
ctcaacggccggccgctcaacagcagccagtacggtggcgcggatatctcctcgattccc
atcgatatcgttaaatcgattaccgttttcaaaccgccggtgccggtctggctgggagcg
ggggcaagcgaaggggccattgtgatcacaacccgggacagtgtggatgcccgtgacgat
gaatccaagcacgttacgcgtatccgtggcgccggtggttcctatggccaggtagagggt
acggtaagtcaccgctattcaatgaaaaagggcggtgccatggttacggccagcggcaag
catcgcgacggcaagcgaaccaacagcgatcgggatagcggagacttatccttgcattgg
gaccgggaactgggtgcaggaaagcgggttgaactgaacgggcgctattacctgtcggaa
tacggttctgccggcccggaggacaatcccacgccggatgctcgccaatcctatcaaaag
ggctctctggacagtcggctgagtggaattatcggttcgacgggtgattatgccttgaac
ctgtacggggacctgatcgatttgaaagatgaaagtcagtccgaattggtgtccaccctg
gacaaccagaaatacgggctgaaagctgagaacaattggaccgatgcggaagaaaaatgg
ggactgcaactctccggcatcctggagcgtgacgatgtggaccataccctttccggcacc
caccatcggaccaccgccgggctcggcgctcaagcggaccgcaactggcaggccttttct
gtgacccttggtgcccgcggcgattacaccagtgactttgacgtaaatcccgggttttcc
ggtggcctgcgctatagtttggccaagcattgggccatcaaggccaatgccggttacacg
gtgaatattcctaactttggccagctttatcagcccagccatggcagcatcgatcagtct
cgtggaaacccggacctggacaaagagaaaatctggtcctacgacctgtcaaccgagttc
cgcaaggggaagtcgcactcatttctggtcaccttgtttcgatccgatgtcagtgatccc
atcacttatgagcgtggtgatgacctgatctaccggccggtgaacgccaatcgcagctgg
cgacaaggggtggaggcggcctggaaatacgcgcttgacttggggctgaccatggatgcc
agtgcggttgtccaggactcggaaatcgaagagaccggcaatgaactgacctatacaccg
cgggtgaaactcaagctggcactgctatacacccttaaatctgtcggtacccgactggaa
acaacggtgcgttatcgcagcaaacagtatagcgagtctcaaaaccgcgaggaccagagc
ctcgatgattacaccaccgtggattttaaagccatccagccgtttaaaatcaagaaactg
gctgtagagtggtttgtcaatctcgataacctttttgataaacgatacgaggttcatcac
ggatacccggatgatggtttcagatttctcaccgggctgaatctgacgttctaa
DBGET
integrated database retrieval system
