Desulfosarcina variabilis: Dvar_49450
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Entry
Dvar_49450 CDS
T10869
Name
(GenBank) sdhB2: succinate dehydrogenase and fumarate reductase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00020
Citrate cycle (TCA cycle)
dvr00190
Oxidative phosphorylation
dvr00650
Butanoate metabolism
dvr00720
Other carbon fixation pathways
dvr01100
Metabolic pathways
dvr01110
Biosynthesis of secondary metabolites
dvr01120
Microbial metabolism in diverse environments
dvr01200
Carbon metabolism
Module
dvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dvr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Dvar_49450
00650 Butanoate metabolism
Dvar_49450
09102 Energy metabolism
00190 Oxidative phosphorylation
Dvar_49450
00720 Other carbon fixation pathways
Dvar_49450
Enzymes [BR:
dvr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Dvar_49450
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_6
Fer4_2
Fer4
Fer4_17
Fer4_21
Fer4_18
Fer4_4
Fer2
Fer4_3
Fer4_16
Fer4_22
Fer4_15
Fer4_20
Motif
Other DBs
NCBI-ProteinID:
XPS86927
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Position
complement(5534378..5535151)
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AA seq
257 aa
AA seq
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MSKIIDLTLKVWRQADPHAKGRLETYKANGISTDMSFLEMIDVVNEQLTKDGKDPIAFDN
DCREGICGMCGCMVNGRAHGAEKGTTLCQLHMRHFKTGDTVVVEPWRSRAFRLIKDLVVD
RGALDKIIQAGGYVSVNTGGAQDANAILVPQENADKAMDAAQCIGCGACVASCPNASAML
FVGAKVSHLALLPQGRPEAARRVQNMLATMDDLGFGNCTNERECEAECPKEISITNIARL
NREYFKAAFGSEYKEQR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaatcatagacctgacgctcaaggtgtggcgccaggcggacccgcatgccaag
gggcgcctggaaacctataaggccaacggtatctcgacggatatgagttttttggaaatg
atcgacgtggtcaacgaacaactgaccaaagacggcaaggatcccatcgccttcgacaac
gactgccgtgaaggaatctgcggcatgtgtggctgcatggtcaacggacgggcccacggc
gcggagaaaggcaccaccttgtgtcaattgcacatgcgtcattttaaaactggcgatacc
gtggtggtcgagccgtggcgttcacgggccttcagactgatcaaggacctggttgtggat
cgtggtgccctggataagatcatccaggccggtggctatgtatccgtcaacaccggtggc
gcacaggatgccaacgccatcctggtccctcaggaaaatgccgacaaggccatggatgcg
gcccagtgcatcggttgcggggcttgcgtggcctcttgtcccaatgcctcggccatgctc
ttcgtgggggccaaggtctcgcacctggcccttttaccccaggggcggcccgaggcggcc
aggcgggttcagaacatgctcgccaccatggatgatctcggtttcggcaactgcaccaac
gaacgcgaatgcgaggcggaatgtcccaaggaaatctcgattaccaacattgcacgctta
aaccgcgagtacttcaaggcggcattcggatctgaatacaaggagcagcgatga
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