Desulfosarcina variabilis: Dvar_49550
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Entry
Dvar_49550 CDS
T10869
Name
(GenBank) SucD3: succinyl-CoA ligase, subunit alpha
KO
K24012
acetate---CoA ligase (ADP-forming) [EC:
6.2.1.13
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00010
Glycolysis / Gluconeogenesis
dvr00620
Pyruvate metabolism
dvr00640
Propanoate metabolism
dvr01100
Metabolic pathways
dvr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Dvar_49550
00620 Pyruvate metabolism
Dvar_49550
00640 Propanoate metabolism
Dvar_49550
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dvr01004
]
Dvar_49550
Enzymes [BR:
dvr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.13 acetate---CoA ligase (ADP-forming)
Dvar_49550
Lipid biosynthesis proteins [BR:
dvr01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
Dvar_49550
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Motif
Pfam:
ATP-grasp_5
Succ_CoA_lig
CoA_binding_2
CoA_binding
Ligase_CoA_2
Ligase_CoA
Motif
Other DBs
NCBI-ProteinID:
XPS86937
LinkDB
All DBs
Position
complement(5550312..5552462)
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AA seq
716 aa
AA seq
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MEGLDALFNPSSVAVVGASSTPGKVGHDIFVNILKGGFTGTLYPVNPKAKSIASVRAYPD
IQDIPDSIDLAIIILPPRFAETAIAHAIDKGVKAVVIVSAGFKEVGGEGLEIERRIVDMC
REAGVRVVGPNCLGVINPNADVQLNASFSSRMPSAGNISFISQSGALCTAVLDFAADKDF
GFSKFVSIGNKADVDELDLLRYFHADPETEVIMLYIEELQRGPEFIEAVKEITGGDRPTP
VLAIKSGRTSAGAQAAASHTGSLAGSESVYDAIFTQSGIIRVESINELFDFGTAFAYKNE
NALGKMRRKVPLGNRVAIVTNAGGPGIVATDMTVSSGLELATFSEETVEALKSHLPETAN
FNNPVDVIGDAAQDRYENALTAVIRDEGVDGALVILTPQSMTNAIGTAEAIVRIARRSHK
PILCCFMGIIDVSAGVKYLQEKGVPVYRFPESAAKTFGALYRYSRWLNRQELAPFSVKHD
KQRAAEIIADALAQGKTYLGEIGGTELLKCYGFNVLPTVLTTSAEMAGDEAEKMGFPVVM
KIVSPQIIHKSDAGGVIVGPDSREAVMTAYQTIVDNAKAYSPDAEITGVLIQRLAPKGHE
VILGMTRYPTFGPLIMFGIGGIFVEIFQDVAFRLAPLTRNGARNMVRSIKGHKLLCGYRG
APKTDIATIERMLVGLSELVVDHPQIKELDINPLLVHPEGEGVTVADCRFILEMPE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccttgatgcattgtttaacccgtcatccgtggcggtggtgggtgcctctagt
acacccggaaaagtgggacatgatatttttgtcaatatccttaaaggcggctttaccggt
acactttacccggtaaatcccaaagccaaatccattgccagcgtgcgtgcgtatccggat
attcaggatataccggattccatcgatctggcgattatcattcttcccccacgtttcgcg
gaaaccgccatcgcccatgccatcgataaaggcgtcaaagcggtggtcattgtttccgca
gggttcaaggaggttggcggcgaggggctcgagattgagcggcggatcgtggacatgtgc
cgtgaagccggcgttcgtgtagtggggcccaactgtctgggcgtgatcaatcccaacgcc
gatgtgcagctcaatgccagtttctcatccaggatgccgtcggcggggaacatttctttt
atttcccaaagtggcgccttgtgtaccgcggtgctggattttgcggcggacaaggacttt
ggtttttccaaatttgtttccattggtaacaaagccgatgtggatgaactggatctgctg
cgctattttcacgccgatccggaaaccgaagtgatcatgctctacattgaagagctgcag
cgggggccggaattcatcgaggccgtcaaggaaattaccggcggtgatcggccgacaccg
gtactggccatcaaatccggtcggaccagcgccggcgcccaggccgccgcgtcacacacc
ggatcactggccggcagtgaatcggtctatgatgccatttttacgcagagtggaattatc
cgggtggagtccatcaacgagctgttcgatttcggcactgcgttcgcctacaaaaatgaa
aacgccctgggtaaaatgcggcgcaaggtgccgctgggaaaccgggtggccattgtcacc
aatgccggcggccccgggatcgtggccacggacatgaccgtttcctcggggctggagctg
gccacattcagcgaggagaccgtcgaagcgctgaaaagtcatttgcccgagacagccaat
ttcaacaaccccgttgacgtgatcggtgatgcggcccaggatcggtatgaaaatgcgctt
acagccgttatcagagatgaaggtgtggatggtgccctggtaattctaacgccccagagc
atgaccaacgccattggtaccgccgaggccattgtccgcattgcccgccgttctcacaaa
ccgattctgtgctgtttcatggggattatcgatgtgtccgccggtgtgaaatatctgcag
gaaaaaggggtgccggtgtatcgtttcccagagagtgccgcaaaaacattcggcgccttg
taccgctattcccgctggctcaatcgccaggaactggcgccattttccgtcaaacacgac
aaacagcgggccgcggaaatcattgccgacgccttggcacagggcaaaacctacctgggt
gaaatcggtggtacggaactgctcaagtgctatggtttcaatgtattgcccacggttctg
accacaagcgcggaaatggccggtgatgaagcggaaaagatggggtttcccgtggtgatg
aaaatcgtctcgccccagatcatccacaaatccgatgccggcggtgttattgtgggcccg
gacagtcgggaggcggtcatgacggcctatcagaccattgtggacaacgccaaggcctat
agtccggacgcagagatcaccggcgtgctgattcaacggctggcacccaagggacacgag
gtgattctgggaatgacccgttaccccacttttggtccgctgatcatgttcggcatcggc
ggtatctttgtggagatcttccaggacgtcgcattccgtttggcgccgctgacccgcaat
ggtgcccgcaacatggtgcgcagcatcaagggacacaaactgctctgcggctatcgcggt
gcacccaagacggatattgccaccatcgaacggatgttggtggggctgtctgaactggtc
gtggatcacccgcagatcaaggagttggacatcaacccgctgctggtccacccggaagga
gagggcgttaccgtggcggactgtcgctttattttggaaatgcccgagtag
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