Desulfosarcina variabilis: Dvar_50520
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Entry
Dvar_50520 CDS
T10869
Name
(GenBank) peptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dvar_50520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_50520
Transporters [BR:
dvr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dvar_50520
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_16
AAA_21
AAA_22
AAA_25
ATP-synt_ab
Mg_chelatase
AAA_7
ATPase
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
XPS87034
LinkDB
All DBs
Position
5661454..5662383
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AA seq
309 aa
AA seq
DB search
MSLLQISNLEIGFRSKDRTMTVVDGIFLDLPRGERATIIGESGCGKSLIAMALLGILPAN
AMIRGTIRFDNQPLTTKYTRSLRQIRATRIGYVPQSAGTCLNPVLKIDTQLREVLHAGNA
KAANASIVAKILERVGLAPAVARLYPHQLSEGMKGRALVGMGTCRHPDLLVADEPTRGLD
NDTKATLVALLRDLTGGGRRSLFLITHDLDVARALPGKLAVMYAGQFVEIGPGHALLNAK
ARHPYTKGLLKSHPENGLHPMPGRPPEVLHRPAGCRFADRCPIVDSACRRRPPACTQVAA
DHWVRCHHV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagccttttgcagatttcgaatcttgaaatcggttttcgctccaaggaccggacgatg
accgttgtggacggaatctttctggacctaccacggggagagcgggcaaccatcatcggc
gaaagcggctgcggtaaatccctgatcgccatggcattgctgggaatcctgcccgccaat
gccatgatccgggggacgattcgcttcgacaaccagccgttgaccacaaaatacacgcgc
agcctgcgtcaaatccgggcaacccggatcggctacgtcccccagagcgccgggacctgt
ctcaaccctgttctaaaaatcgacacccagctcagggaggtcctgcatgccgggaatgcc
aaggcagcgaatgcatcgatagtcgcaaaaattctggaacgggtgggtcttgcaccggcc
gtggcccgtttgtatccgcaccagctcagcgaaggcatgaagggccgggccctggtggga
atggggacctgtcggcaccccgacctgctcgtggccgacgagccgacccgggggcttgac
aatgacaccaaggcaacccttgtagccttgctgcgcgatctgaccggcggcgggaggcgg
tcactgtttctgatcacccacgatctcgacgtggcccgggcactacctggaaagctggct
gtcatgtatgccgggcagttcgtggaaatcggtcccggccatgccctgctgaacgcaaag
gcccgtcatccctatacgaaaggactgctgaaaagccatccggaaaatggcttgcacccc
atgccgggccggccccccgaggttttgcatcggccggcgggctgccgcttcgccgaccgc
tgccctatcgtcgattctgcctgccgacgccggccgcctgcatgcacgcaagtcgccgcc
gaccattgggtgagatgccaccatgtttag
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