Desulfosarcina variabilis: Dvar_52940
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Entry
Dvar_52940 CDS
T10869
Name
(GenBank) ABC-type glycine betaine/proline transport system, periplasmic binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dvar_52940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_52940
Transporters [BR:
dvr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
Dvar_52940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
DUF1582
Motif
Other DBs
NCBI-ProteinID:
XPS87276
LinkDB
All DBs
Position
complement(5948207..5949160)
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AA seq
317 aa
AA seq
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MKNHYVRKYYLSIALIAMMMMVTTIASAAEKIRIASVAWTGVTIKSELAVSLLKSLGYEA
ENKVYGVPFVYAALSSDSADVFFGNWMPSMATVANKFFSDGSVIKYVANMPGAKYTLAVP
SYCADGGLKDFSDIVKYGEKLDWKIHGIEAGNDGNLIIRNMIENNLFGLGKFEIMPSSEV
AMLAEVQSRVKQKRCIVFLGWSPHSMNERIDMTYLTGSTDATFGPNDGTATVWTNIRKGF
DQEQPNVAQLVKNMTFSIDMMNQIMTAVYADKGLKPEKAGLAWLKDHPDVYRAWLKGVTT
SDGKDSVAAFEDYLRGM
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatcattacgtcaggaaatactatctttcgatcgccttgatcgccatgatgatg
atggttacgacaattgcttctgccgccgagaaaattcggatcgccagtgtggcctggacc
ggggtcaccataaaaagcgagctggcggtatctcttttaaagagccttggctacgaggcg
gagaataaggtctacggcgttccatttgtctacgcggccctttccagcgacagcgcggat
gtcttttttggcaattggatgccttcaatggccacggtggccaacaaatttttttccgat
ggatcggtgataaaatatgtggccaacatgcccggcgccaaatacacgctggctgtgcca
agctattgcgctgatgggggactgaaagacttctccgatatcgtaaaatacggcgaaaaa
ctcgactggaagattcacggtatcgaggccggaaacgacggcaatctgattatccgcaac
atgattgaaaacaatttgttcggcctgggaaagtttgaaatcatgccttccagtgaagtg
gccatgctggccgaagtgcagtcccgcgtcaaacaaaagcgctgcatcgtttttctggga
tggtcgccgcacagcatgaacgagcgaatcgacatgacctacctgaccggcagcaccgat
gcgacgtttggccccaatgacggtacagccacggtgtggaccaatattcgtaaagggttt
gaccaggagcagcccaatgtggcgcagctggtgaagaatatgaccttttccattgacatg
atgaaccagatcatgacggccgtttatgccgataaaggcctcaaaccggaaaaggccggt
ctggcatggctcaaggatcatccggacgtgtatcgcgcatggctgaagggggtgaccacg
tcggacggtaaggattctgtagcagcgtttgaggattatctgagaggtatgtag
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