Desulfosarcina variabilis: Dvar_53240
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Entry
Dvar_53240 CDS
T10869
Name
(GenBank) LysA1: diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00300
Lysine biosynthesis
dvr00470
D-Amino acid metabolism
dvr01100
Metabolic pathways
dvr01110
Biosynthesis of secondary metabolites
dvr01120
Microbial metabolism in diverse environments
dvr01230
Biosynthesis of amino acids
Module
dvr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dvar_53240
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dvar_53240
Enzymes [BR:
dvr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Dvar_53240
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
XPS87306
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All DBs
Position
5979295..5980503
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AA seq
402 aa
AA seq
DB search
MSPQKQRLWWEREDLCYKDGHLIFSGASVSDLIGLTGTPAFFYSGRRICQNIERIHNALS
SLDAHQIYYAIKANRFAPILTSIKRAGMCGVDVCSPGELLHAFSCGFERSEISYTANSMT
DDELRLLANNPDVALNCDSLSTIRRLGKFCSGRKIGIRVNPALGIGYRDNETLKYSGDKT
TKFGIYRDQFEDALRLAGEHNFIVDTIHFHTGCGYLSNQLSIFNGILDETHWFVDKVKDL
ACINLGGGLGVPHDMDDAPLDLDAWVSIIKSHFGNKGVTICVEPGDYIVKDSGLLVLEVN
TVERKQQTDFIGVNGGFNLAIEPTFYGLPCEPVVLEQKTNAMKPVTIVGNINESLDVWKD
NFQMPDQIEEGDPLVFINAGGYASSMMSNHCMRGQVSENFLF
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacaaaaacagcggttgtggtgggaaagagaagatctctgttacaaagacggg
cacttgattttttccggggcttcggtgtcagacttaatcggtttaaccgggacaccggcc
tttttctatagtggaagacggatttgtcaaaatatcgagcgtatacacaatgctctgagc
agccttgatgcgcatcaaatctattatgccatcaaggcaaaccggtttgccccgatcctg
acgtccattaaacgcgcagggatgtgtggggtggacgtatgttctcccggtgaattgtta
catgcgttttcctgcggttttgagcgcagtgaaatttcatacacggcaaactcgatgacc
gatgacgagctccggttgctcgccaacaaccccgacgtggctttaaactgtgactcctta
agcaccatccggcgattgggcaaattctgctccggtcgaaaaatcggaattcgtgtcaac
ccggctctgggtatcggctacagggataatgagaccctgaaatatagcggagataaaacg
accaagtttggcatctacagagatcagttcgaggacgcgctgcggcttgcaggtgagcat
aacttcatcgtggataccatccatttccataccggatgcggttatctgagcaatcaatta
tccatattcaatgggattctggatgaaacccactggtttgtggacaaagtcaaagatctg
gcgtgcatcaatctggggggcggactgggggttccccatgacatggatgatgcaccgctc
gatttggacgcctgggtttccattataaaatcccattttggaaataaaggggtcaccatc
tgtgttgaacccggagattatattgtaaaggacagcgggcttctggttctggaggtcaac
accgtcgagagaaaacagcaaaccgatttcattggggtcaacggcgggtttaatctggcc
atagagcctactttctacgggttaccctgtgagcctgtcgttctcgagcaaaagacaaat
gcgatgaagccggtgacgattgtgggcaatatcaacgagtcgctggatgtatggaaagac
aatttccaaatgcccgatcaaatagaagagggagacccacttgtttttatcaatgcgggt
ggatacgcgtcttcaatgatgtccaatcactgtatgcggggacaggtttctgagaacttt
ttattttga
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