Desulfosarcina variabilis: Dvar_53780
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Entry
Dvar_53780 CDS
T10869
Name
(GenBank) uncharacterized protein
Organism
dvr Desulfosarcina variabilis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
InPase
Motif
Other DBs
NCBI-ProteinID:
XPS87360
LinkDB
All DBs
Position
complement(6043026..6049793)
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AA seq
2255 aa
AA seq
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MNIDNLLSHPDYQSLSNEDKAAARLGWLEKNVVSKPEFQELPEEDKIAALNGFEQLVKTK
TGTNSDSKEPGSSRVPTAIDEWKKDAEFNALPYREKRQVLGNYFDLNMADDEFFTMDYAE
QDRIKENYFNTYLGPAPKDFTPSTSADAPESSNQEPSVANEFGKGLVRGVAGIPESVGLG
IQYTGQRLKGENRSEEYARNPNQAFARMLQSQRDDVVKTMGQYEKQGIPRDQAFQKAVLN
VLQGDFEKRQQIGDNISAFGKTAADYWAKKQEPFAPHESINGKNVWDNPELLTNAAWWAS
GVGEMLPSLAASVVPAVGAQQATLKIGGRLIASTPQAWAKLGQLATVVGAGTGGLVGGAL
EGSQTYKQVLEETGDEAQAARAGEMMTAAAGVLNSIGNANFLEALGKNVVSRFGYGFAIE
GVTEGAEEPAEVGAKLAAAIIEGKPLPDNVTQQFLDAFKQAATVFPIAGLVGGGAASTRS
KAHKAIEETLPAEERNKSAEELLDDQAPAQPDPAQEIRKSLARGEIGTDHVKALRAQVRD
NHPMAKELDNILAEVQASNQATQDQPAPSEKPKWLTSMTDDQVMKRVRNLQKSERQTGRL
SEKQRQNLTTLNQEMADRGIKSAAESATVFQEAMSSEDQARIKALNEKAATAKAEAVEGL
TRETGKSAEESARVMLTEQEIANNRMIREGVPAARKFVQENPEAYQVAQSIHSAPSKESV
SIPQTPALPAGQGFQLVENKNQIPPELRPAFQKMRESVEAGDAKNRNAKGHPTGSTYPDW
FKTISKRDRKAMQKAGVVPTGGWSRKEFERIIEKAENGEEMTERQEARFEQLLRVAEQVK
GTDPDLVADADADAIESQGFEPVMDKMPVGNLKKGDQVLVRTDKGEDVLTHKGYDSQGDA
ILQDGETIKADPFDQIMIDGIKKNESDQAAEIDAQAHEAATSPRNNLPEPTEAQIKAGNY
KKGHVTVNGLDISIENPEGSTRKGVDEDGKKWESTMIGHYGYFARSEGKDGEQIDVFVGH
EPSNKVFIVDQVDPGTGRFDEHKIVMNASDEESAKGLYRFNYEPGWQGLGAITEMPIDQF
KDWLSKGKQTKPVGDISASGRTQASPPVITIQDVQQAFPKQKVRQSGEGAFTINTGSGHS
ITLHGVESIDDDEIGLKFSSTNEITARGKRQIAGAYDPKSQTIRIVKGVGDRSTIRHESY
HFLESSNLIKPQEVKALNNTILQKTGKKANEEARAKFVEAELKKREFNRHSGPVRQALQR
VADWIDSLVNLVKKTSRGVIRNIESGKAFNRRPSPGKPKSSETRYSIKEPIDPSEWAKQF
LKDHLENDQQAKESVEKLKEAGKSDTVIHDEAKGLFGYVKERFGKGFVDDDMKWYDRAFG
LPYWLGKKYESMNAAVDIEINAAEIRAKELFNDYDGELGRIQESIPKNKKRMQELRDLIW
KWDGQRFPKKAVPSDWYREIEDSGEIEINTDHYEEVRAFLKEDGVSKPVIDAFMTIRQKL
DEKWIDAERTLRGENLDQTTIEEYRSMIKKTHNYFPHRRTGNAHVSIINKDTGDVVYREH
YNTAKDRILPINKKAKARAGTWLKEAIEKGNVTEKNRSAYEIKIGPVKKLPDEAFFQIPA
EAMQLLVTEAGKRLENARVGYEAERLYNRQGKTKKEAIELARKRMRADMDAALSKAVAEV
FQSRGWASHAIGRKGTPGHETDDIFGILFDYLSGYAGFKTKISRAMAHHDNLMKVDPKQH
PNEYRHLSKYVKDMLANQDRVDKSVDSLRGLFFVKYLGFVVKSGMVNLTQNVVMAAPVLS
IHTKGGILKAERILGKAMFDVRKALTSKAAWTGKKIDYATLSKDEQQALHELVESGASMD
LFLKELKGNMPGSGWTKHFKKVVDKAGIFMGVAEKFNRASTGLAAYRLALKEKGMQHDQA
VDFAKQVIYDSHFIYGKVNLPTAFRGGDFQKVARAAYTFRSFTHNYVSAMVHLLTNSGWS
GKRAFARSLRNLFVVGGLTAIPFFKALSEALLWSMGDDDEDAMTIVRESLPNEWLRDLAV
YGLPGVAGVDLTGSLSIEVPRSWKDLAGVPYAMIEDTVNAVESLKSGAHYRVLSETPFTP
IAVRNAMRGIELYALGQHTRSGKAINYHGAKGPRKISASEAVLKSLVGLQPVSSSKSYGA
YQATQKMQDALQEKKSKWASRYVNAMIRMDAETMEKVKAEVTEWNVKARKEGKPHKIINI
RQAVAYRLKPSSKYLPKTLRKEATKIAEAWGKEDS
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagacaacctgttatcacatcctgattaccaaagcctctcgaacgaggacaag
gccgccgcccgtctgggctggctcgaaaagaatgttgtctcgaagcctgaatttcaggaa
cttccagaggaagataagattgcagccctgaacggattcgagcaactcgtaaaaacaaaa
acgggcacgaacagcgattcaaaagaacctggatcatcgagagtgccaaccgctatcgac
gagtggaaaaaagacgcggaattcaatgccctgccttatagagagaagcgccaggtattg
ggcaattattttgacctgaatatggccgacgatgaatttttcaccatggactatgccgag
caggaccgtatcaaggaaaattacttcaatacttaccttggacctgccccgaaagacttc
acaccgtcaacgagcgctgatgctcctgagtcatcaaaccaagaaccttcagtagcgaat
gaatttggcaaggggctcgtccggggcgttgcggggattccggagagtgttgggcttggt
attcaatacacggggcagcgcctcaaaggtgaaaatcgctccgaagagtatgcgcggaat
cctaatcaggcctttgcccgtatgctgcagagtcaaagagacgatgttgttaagacgatg
ggccagtatgagaaacagggaatacctcgtgatcaagccttccagaaggcggtgctcaat
gttcttcagggcgacttcgagaaacgtcagcagatcggtgacaatatttcagcgtttggg
aaaacagccgccgactattgggctaagaaacaagagccctttgccccccatgagagcatt
aacggaaagaacgtatgggataaccccgagctacttaccaacgcagcgtggtgggcttcc
ggggtgggtgaaatgttgccgtcattggcggcttcagtcgttccagccgtgggagctcaa
caggctactttgaagatcggtggccggttgattgcctcgacaccgcaggcgtgggccaag
ctgggccaacttgccacggttgtaggcgccggtaccggtggcctcgtcggtggtgctctt
gaaggcagccagacctataagcaggttttagaggaaaccggagacgaagcacaggcggcc
cgggcgggcgaaatgatgacggccgctgccggcgtgcttaactcgatcggtaatgccaat
ttccttgaagcccttggtaaaaacgttgtcagccgcttcgggtacggtttcgccatcgag
ggagttaccgaaggtgccgaggagccggccgaggtcggtgcgaagcttgcggcggccatt
attgaaggtaaaccactgccggacaatgtcacccagcagtttttagacgccttcaaacag
gcggccaccgtattcccgattgccggtctcgtcggtggtggtgccgcttccacgaggagc
aaggcgcataaagccattgaggaaacgcttccagctgaagaacgaaataaatcagctgaa
gagctgctggacgatcaagccccggcccaaccggatccggcccaggagatcaggaagagc
cttgcccggggagagatcggaaccgaccatgtgaaggcattgcgcgcgcaggtcagggat
aaccatccgatggccaaagaactggataacatccttgctgaagttcaagccagtaatcaa
gccacccaggatcagccggccccttctgaaaaaccgaaatggttgaccagcatgaccgat
gatcaggtcatgaaacgcgtcaggaacctgcagaagagcgaacggcaaaccggcagatta
tcggaaaagcagcgtcagaacttaacaaccctgaatcaggaaatggctgatcgagggatc
aagtccgctgccgagtccgcgacggtgttccaggaggccatgtccagtgaggaccaagcc
agaataaaggccctgaacgagaaggccgctacagccaaggccgaagccgttgaaggactc
acccgcgagaccgggaagtcagctgaggaatcagcccgggtgatgctcaccgagcaggaa
atagccaacaaccggatgatcagagagggtgttcccgctgcgaggaaatttgtgcaggaa
aatccggaggcctaccaggttgctcaaagcattcattcagcgccatccaaggaatcggta
tcaattccccaaacacccgccttgccagccggccaggggtttcagctggtcgagaacaaa
aaccagattccccccgagcttcgtccggcatttcagaaaatgcgcgaatcagtggaagcc
ggtgacgccaagaaccggaacgccaaaggacatccaacaggctcaacctatcccgattgg
ttcaaaaccatatccaagcgggacaggaaagccatgcagaaggccggcgtagtgcctacc
ggaggatggtcccgcaaggaatttgaaaggatcattgaaaaggcggaaaacggggaggag
atgaccgaacggcaagaggcccggtttgaacaattgctcagggtggccgagcaggttaag
ggcaccgacccggaccttgttgccgatgctgacgccgatgcaatcgagagccaaggcttc
gagcccgttatggataaaatgccggtcgggaacttgaaaaaaggcgaccaggttcttgtc
cgaaccgacaagggcgaggatgtcctaactcacaaaggatatgattcccaaggggatgcc
attctacaagacggtgaaacgataaaggccgatccgtttgaccagatcatgattgatggt
atcaagaaaaacgagtcggaccaggcggcagagatcgacgcccaggcgcatgaagcagcc
acctccccgaggaacaaccttccggaaccgacagaggcccaaatcaaggcaggcaattac
aagaagggccacgtcacagtcaacggtttggatatctccattgaaaatccagaagggtca
acccgcaaaggtgtggatgaggacggaaagaagtgggaatcgacaatgatcggacattat
ggatatttcgcacgatcagaaggaaaagacggcgagcagatcgatgtgtttgttgggcat
gaaccgtctaataaggttttcatcgttgaccaggtagacccggggacaggccgttttgat
gaacacaaaatagtgatgaacgcttctgacgaggaatcggccaagggcctttaccgcttc
aattatgaaccggggtggcagggcctgggggccattactgaaatgccgatcgaccaattt
aaggattggctatcaaaagggaagcaaaccaagcccgtaggtgatatctcggcttctggc
aggacacaagcctcaccgcccgttatcacgattcaggacgttcaacaggccttccccaaa
cagaaggttagacaaagcggtgaaggagcgtttaccatcaacaccggttccgggcattcc
atcaccttgcatggggttgagtccatcgatgacgatgagattggcctcaagttcagttcg
accaacgagattaccgccaggggcaagcggcagatagctggcgcctatgatccgaaaagc
caaaccatccgcattgtaaagggggtgggtgatcgatcgacgatcaggcatgaaagctat
catttccttgaatcatccaatctcatcaagcctcaagaggtgaaagccctaaacaatacc
atccttcagaaaaccggtaaaaaggccaacgaggaggcccgggcaaagttcgttgaagcc
gagttaaagaaacgagaattcaaccgccacagcggaccagtacgccaagcccttcagagg
gtagcggattggatagacagtctggtgaacctggtcaagaaaacgtcccgtggtgtgatc
aggaacatcgaaagcggcaaggccttcaaccgccggccgtcacccggcaagcccaaatca
tcagaaacccgatacagtattaaggaaccgatagaccccagcgaatgggcaaagcagttc
cttaaagaccaccttgagaacgaccagcaggctaaagaatcggtcgagaagcttaaggag
gccgggaagtccgatacggtcattcatgacgaagcaaagggtttgttcgggtacgtcaaa
gaacgtttcggcaagggcttcgtcgatgacgatatgaagtggtacgaccgggcttttggc
ctgccttattggctgggcaagaaatacgagagcatgaacgccgcggttgacattgagatc
aacgccgccgaaatccgggccaaagagttgtttaacgactatgatggtgagcttggccgg
atccaggaatcaatccccaagaataaaaagcgaatgcaggagcttcgggatcttatttgg
aaatgggacggtcagcgctttccgaaaaaggcggttccaagtgattggtatcgggagatt
gaggacagtggggagatcgagatcaacaccgatcactatgaggaagtccgggctttcctg
aaagaggacggggtttccaaaccggtaattgatgcctttatgaccatccgtcaaaagctg
gatgaaaaatggatcgatgcagagcggacccttcggggtgagaacctggatcagaccacc
atcgaggaatatcgctcgatgattaaaaagacccacaactatttcccacaccgccggacc
ggtaacgcccatgtgtcgatcatcaacaaggataccggggatgtcgtttaccgtgagcac
tacaacacagccaaggaccggatattgcccatcaacaaaaaggccaaggcacgggcaggg
acatggttgaaagaggcaatagagaagggcaacgttaccgagaaaaaccgttccgcctat
gagatcaagatcgggccggtaaagaagcttcctgatgaggccttttttcaaatacctgcc
gaggcaatgcaacttttggtgaccgaagccggcaagcggttggaaaatgcccgggttgga
tatgaggccgaacgtctctacaaccgtcagggtaagacgaagaaagaggccatcgagctt
gcaaggaaacgcatgagggccgatatggatgccgctttgtccaaagccgtagccgaagtc
tttcaatccaggggttgggcttcccatgccatcgggagaaaaggcaccccagggcatgag
accgatgatatttttggtatcctgttcgactacctgagcggttatgccggattcaagacc
aagatcagccgggctatggcccaccatgacaatcttatgaaagtggatccgaagcagcac
ccgaacgaataccgccacctttccaaatacgtcaaggatatgctggccaaccaggaccgg
gttgataagtccgttgacagtctccgcgggctgttcttcgtcaaatatcttggctttgtg
gtcaaatcggggatggtcaacctcacccagaatgttgtcatggctgccccggttctctcc
atacacaccaagggcgggatactgaaggccgaacgaatccttggaaaggctatgtttgat
gtccggaaagctttaaccagcaaggccgcatggaccggtaaaaagatcgactatgcaacg
ctttcaaaggacgagcagcaagccctgcatgaacttgtcgagtctggggcttccatggac
ttattcctgaaagagctcaagggcaacatgccggggagcggctggaccaagcactttaag
aaggtggtcgataaggccgggatcttcatgggggtggccgagaaattcaaccgagcgtcc
accggtctggcagcctatcgtctggccctcaaagaaaagggcatgcaacacgaccaggcc
gtggatttcgccaaacaggtaatttacgacagccactttatttacggcaaggtcaacctg
cccactgctttccgtgggggagacttccagaaggtggccagggccgcatacacattccgc
agttttacccacaattatgttagcgccatggttcacctactgacgaattctggatggtcc
ggaaaaagggcatttgcacgaagcctacgcaatctttttgttgtcggagggttgacggcc
atcccgttctttaaagccctgtctgaggctttattatggtcgatgggcgacgatgacgag
gatgcaatgactatcgttcgggaaagcttaccaaacgaatggttgagagatttggcggtc
tatggcctgccaggggtggccggcgtcgatctgaccggctccttatcgattgaggtgccg
aggtcctggaaagacttggccggcgtcccctatgccatgattgaggatacggtcaacgca
gttgagagcctgaaatcgggcgcccattaccgggtcttgtccgagacaccatttacgccg
atcgctgtgcggaacgctatgcgagggatcgaactttatgccctgggccagcatacccgg
agcggcaaggccatcaattaccatggcgccaaaggcccgagaaagatcagcgcaagcgaa
gcggtattgaaaagtttggtgggactacagccggtctcttcctcaaaatcctacggtgct
tatcaagccacccaaaagatgcaggatgcccttcaggaaaagaaatcaaaatgggcaagt
cgatacgtcaacgctatgatccgcatggacgcggaaaccatggaaaaggtcaaggcagag
gtgaccgagtggaacgtcaaggcaaggaaggagggtaagccacacaagatcattaacatc
cgccaggctgttgcctatcgactgaagccaagctcgaaatatttgcctaaaacgttgcgt
aaggaagcaactaaaatagctgaggcctggggcaaggaagattcttga
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