Desulfosarcina variabilis: Dvar_55330
Help
Entry
Dvar_55330 CDS
T10869
Name
(GenBank) HmgL1: hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00280
Valine, leucine and isoleucine degradation
dvr00650
Butanoate metabolism
dvr00907
Pinene, camphor and geraniol degradation
dvr01100
Metabolic pathways
dvr01120
Microbial metabolism in diverse environments
dvr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Dvar_55330
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Dvar_55330
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Dvar_55330
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Dvar_55330
Enzymes [BR:
dvr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Dvar_55330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
XPS87515
LinkDB
All DBs
Position
6222015..6223181
Genome browser
AA seq
388 aa
AA seq
DB search
MTEYDYWKIFPRMPKKVTLGDITVRDGFQHLEKFISTRAKIFYAENMIFAGCRNIEVTNL
GNAYLMPQFSDAEAVLRHLRSDRFRARCEKKGINYDDLTITAVTIREPAVDRAIELAKRG
IGPDRCLMMVSTEEEHHFANSGTTLPDYWKECERAIQKCRDAGLQMCGTVSTIWGSPIAG
ATELKDAVEFTKRWLEIGATDIEHADHDGSASAPEVYRYFSMVLDEIPDPSLHIAHFHET
KRMASASALAAMQAGISHFEGTLGGLGGQPANFLDDCPVPGTGDYYYEDPRYVGLICLED
LLVQIDEMGIAHGYDVDRVLWLGRQMERTVGQRLRSEAVINGRTLKDGHMKFARPGLARR
KEALGEAPGQNIPEGWREMAILPVQYHP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatatgattattggaaaattttcccgcggatgccgaaaaaagtgaccctgggt
gacatcaccgttcgagacggatttcaacatctggaaaaattcatctccacccgggccaag
attttctacgcggagaatatgatctttgccggttgtcgcaacatcgaggtgaccaacctg
ggcaatgcctatctgatgccccagttcagcgatgccgaagcggtgctgaggcaccttcgc
agcgaccggttcagggcccgctgcgagaaaaaaggaatcaactatgatgatctgaccatc
accgccgtgaccatccgggaaccggccgtggaccgggccatcgagctggccaagcgtggc
atcggcccggatcgctgcctgatgatggtatcaacagaagaagagcatcatttcgccaac
tccggcaccacacttcccgactactggaaagagtgcgaacgggccattcaaaaatgccgc
gacgccggccttcagatgtgtggtacggtaagcaccatctggggcagtcccattgccggg
gccaccgagcttaaggatgccgtggagtttaccaaacgctggctggaaatcggtgccacc
gatatcgagcatgccgaccatgacggcagcgcatccgccccggaggtgtatcgctatttt
tccatggttctggatgaaatccccgatccgtccctgcacatcgcgcactttcacgaaacc
aagcgtatggcctcggcatcggcattggctgccatgcaggcggggatttctcattttgag
ggtacgctgggcggcctgggcggtcaaccggccaattttctggacgactgtccggtacct
ggaacgggagactattattacgaagatccgcgctatgtgggcctgatctgccttgaggat
ttactggtccagattgatgaaatgggcatcgcgcacggctatgatgtggaccgggtgctg
tggctgggccgccaaatggaacgaaccgtgggccagcgcctgagaagtgaggcggtcatc
aatggacggacccttaaagatgggcatatgaaatttgcccgtccaggtctggccagacgc
aaagaggcgcttggcgaggcacccggtcaaaatattcctgaaggatggagggaaatggcg
atcctgcccgtgcagtaccacccgtaa
DBGET
integrated database retrieval system
