Desulfosarcina variabilis: Dvar_55870
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Entry
Dvar_55870 CDS
T10869
Name
(GenBank) TruA: tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvr03016
]
Dvar_55870
Enzymes [BR:
dvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Dvar_55870
Transfer RNA biogenesis [BR:
dvr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dvar_55870
Prokaryotic type
Dvar_55870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
XPS87569
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All DBs
Position
6285183..6285938
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AA seq
251 aa
AA seq
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MPNRPRTKTFKLIIEYDGSGFHGWQRQKNDRTVQETIEKAIGRMTGEQCTLIGSGRTDAG
VHARAQVASFQTASRLDATIFLKGLNSLLPDDVSIRGCTQMADGFHARFDVRSKHYRYHI
VNAPIAPAIGRQFVWHIRKPLDTAAMRQAADHMVGTHDFKSFEGAGSPRAHTVRTVTESM
IRLADGGRLTYDIRADGFLRFMVRNIVGTLVEVGLDKRPADAMPAILASKDRSQAGATAP
PQGLFLMDVTY
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatcgcccccggaccaaaacctttaaactgatcatcgaatacgacggctctggt
tttcacggttggcagcgtcagaaaaacgaccgcaccgttcaggaaaccatcgaaaaggcg
attggccgcatgaccggagaacagtgcacccttatcggttcgggaaggaccgatgccggt
gttcatgccagggctcaggtggccagctttcaaaccgcctcccgtctggacgcaaccatt
tttttaaaagggctcaacagcctgctgcccgatgacgtcagcatccgcggttgcacacaa
atggcggacggcttccatgcccgctttgatgtgcgctccaaacattatcgttaccacatc
gtcaacgcccccattgcgccggcaattggcaggcagtttgtctggcatatccgcaaaccc
ctggacaccgccgccatgcggcaggccgcagaccatatggtgggcacccacgatttcaag
tcctttgaaggggccggcagtccccgcgcccataccgttcgcacagtcaccgaatcaatg
atccggctggccgacggcggcagactgacctacgacatccgggccgatgggtttttacgc
ttcatggtcagaaatatcgtaggaaccctggttgaggtgggactggacaagcgtccggca
gatgccatgccagccattctcgcctccaaagaccgcagccaggccggtgcaaccgctccg
ccccaggggctttttttaatggatgtcacctattaa
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