Desulfosarcina variabilis: Dvar_56360
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Entry
Dvar_56360 CDS
T10869
Name
(GenBank) CbiO: putative cobalt import ABC-binding protein
KO
K16784
biotin transport system ATP-binding protein [EC:7.6.2.-]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dvar_56360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_56360
Transporters [BR:
dvr02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Biotin transporter
Dvar_56360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_22
AAA_25
AAA_15
AAA_29
AAA_30
AAA_19
nSTAND3
AAA_16
AAA_18
RsgA_GTPase
NACHT
nSTAND_NTPase5
AAA_27
DnaB_C
cobW
ORC-CDC6-like
AAA_28
Zot
AAA_13
ABC_ATPase
NTPase_1
Zeta_toxin
MobB
FtsK_SpoIIIE
Viral_helicase1
AAA_14
ATPase_2
DUF3584
Motif
Other DBs
NCBI-ProteinID:
XPS87618
LinkDB
All DBs
Position
complement(6332114..6332863)
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AA seq
249 aa
AA seq
DB search
MSIIQINTLSHRFADGSLGLDHVSLALNEGELSVIAGANGSGKTTLLRHLNGLLVAQSGD
VRVCGLSVKKDPSAARRLVGMVFQDADSQIVGETVYDDVAFGPENLALPRDEIDQRVSRA
LAAVDLCGFENKRPHYLSGGEKRRLAIAGVLAMRPKVLLMDEPFSNLDFPATVRVLDQIL
ELHQNGHTIVITTHDLEKVIAHTQRLVIMAKGRVVQDGHPEKIIHGIQDYGIRPPCSVQL
GRGIRPWAS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcattcagatcaacaccctttcccatcgttttgccgacggtagcctggggctt
gaccatgtcagcctggcactcaatgaaggtgaattgagtgtcatcgccggtgcaaatggt
tccggcaaaacaaccctgctgcgccatttgaacgggctgctcgtggcccagtccggagac
gtgagggtctgcggcttgtcggtgaaaaaagatccgtcggccgcccgacgtctggtgggg
atggttttccaggatgcggacagtcagattgtcggtgaaacggtttatgacgatgtggcc
tttggccctgaaaatctggcgctgccaagagacgaaattgaccaacgggtaagccgggcg
cttgctgccgtggacctttgcgggtttgaaaacaagcggccgcattacctgtcaggtggt
gaaaagcggcgcctggccattgccggggtacttgccatgaggcccaaggttcttttgatg
gacgaacctttctccaatctggatttccctgcaacggtcagggttcttgatcagattctt
gaactacatcaaaacggacataccatcgtcattaccacccacgatttggaaaaggtaatc
gcccatacccagcgtttggtgatcatggccaaggggcgtgtggtccaggatggtcaccct
gaaaaaataatccatggcatccaagactatggcatccggccaccatgctctgttcaattg
ggtagaggcatccgtccatgggcgagttga
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