Desulfosarcina variabilis: Dvar_60030
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Entry
Dvar_60030 CDS
T10869
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K02005
HlyD family secretion protein
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Dvar_60030
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GFIT
Motif
Pfam:
Beta-barrel_YknX
YknX_C
Beta-barrel_RND_2
Beta-barrel_AprE
RND-MFP_C
CzcB_C
BSH_RND
mRNA_cap_enzyme
Tweety
CCDC39
Motif
Other DBs
NCBI-ProteinID:
XPS87985
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Position
complement(6716598..6718028)
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AA seq
476 aa
AA seq
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MLAAAIAFSLFRCFSQPSEAVSETHIVRAMEGDLEISVKTVGVMDAARTHMISSAVRGDK
GKIIFLVEDGSSVAKDDILIRLDPTPFETEIHRLGGEVRSLEAAVESARQMLKWEENQTQ
RQIRTAKYDLKVARLELRRMLEGEGPLQLAQYKNELDKVEDEYVRYKAYIADLITLQEQG
FANPNELSLARKKVDTLEQQYQTARQRHESYKEHVLPTLIETARTSVDKAGIEVQQLEKG
ATFKVARAASALAEVEGKLETAQVALQQALAELKKTTIRAPFSGIAILYETFRDGQKRKP
RVGDRVWQNQPLLYLPDISTMIVKTQVREVDLHKVAIGQACSVRVDAYPETTISGKVTAI
GMLATQRFEGGVGEKYFQLTVTLTGKNSRLRPGMTARITISSDNATNVIFIPVHAVFDDG
VNTFCYLVDAGGRLFKKKVALGRQNEDWVEIVTGLEEGDRVSVIRPNADQIADESP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcggcggcaattgcattttccttgttccgctgcttttcacagccatcggaagcg
gtcagtgaaacgcatatcgtgcgggccatggaaggagacctggaaatcagtgtaaaaacg
gtgggggtcatggatgcggcgcgcacgcatatgatatcgtctgcggtcaggggtgataaa
ggcaaaatcattttcctggttgaggatggctccagtgtcgccaaagacgatatcctgatt
cgccttgatcccacgccatttgaaacagaaatccaccgcttgggtggtgaagtgcggagt
ttggaagcggctgtcgaatcggcccggcagatgctcaaatgggaagaaaatcagacacaa
cggcaaatccggacggcaaaatatgatttgaaagtcgcccggcttgaattgcgccgaatg
ctggaaggcgagggaccgctgcaactggcgcaatacaagaatgagcttgacaaagtcgag
gacgaatatgtccgttacaaggcctatatcgccgatctgatcacgcttcaggaacaggga
ttcgccaatcccaatgaactctcactggcgcgcaagaaagtcgacacactggagcagcaa
taccagaccgcccgccagcgccatgaaagttacaaagaacatgttctgccgaccctgatt
gaaacggctcgaacgagtgttgacaaggccgggattgaagttcagcagcttgaaaaaggg
gcaacgtttaaagtcgcccgggccgcgtcagcccttgctgaagtcgaaggaaaactggaa
accgctcaagtcgccctccagcaggcgcttgccgaactgaaaaaaaccacgatccgggcc
ccctttagcggcatcgccattctttatgaaacctttcgggatggacaaaaacgcaagccc
agagtgggggatcgggtctggcagaatcagccgctgttgtatttgccggatatttcgaca
atgatcgtcaaaacccaggtccgtgaggtcgatctgcacaaggtcgccattggccaggcc
tgttcggtaagggtggatgcctacccggagaccaccatcagtggtaaggttaccgccatt
gggatgcttgccacacaacgctttgaaggcggtgtcggcgaaaaatatttccagctcacc
gttaccctgacgggaaaaaacagccgtctgcggccggggatgacggccaggatcaccatt
tcctcggacaacgccaccaacgtcatttttattcccgtgcatgccgtttttgacgacggc
gtgaacacattttgttatcttgttgacgcaggtggcaggttatttaaaaagaaagtcgcc
ctcgggcgccagaatgaagattgggtggaaatcgtcaccggtctcgaggaaggggacagg
gtcagtgtcatcagaccaaacgcggaccagatagccgatgaatcgccatga
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