Desulfosarcina variabilis: Dvar_60080
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Entry
Dvar_60080 CDS
T10869
Name
(GenBank) ThrS: threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Dvar_60080
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dvr01007
]
Dvar_60080
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvr03016
]
Dvar_60080
Enzymes [BR:
dvr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
Dvar_60080
Amino acid related enzymes [BR:
dvr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Dvar_60080
Transfer RNA biogenesis [BR:
dvr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Dvar_60080
Prokaryotic type
Dvar_60080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
PPV_E1_C
Motif
Other DBs
NCBI-ProteinID:
XPS87990
LinkDB
All DBs
Position
complement(6722324..6724240)
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AA seq
638 aa
AA seq
DB search
MVHITLPDGSRKPFEDYPTGLDVAKSISEGLARDCVAMVVDDHVVDLNRPIKADAAIRLI
TTRDPEALEIMRHSAAHVMAQAVLKLYPDAKLTIGPVVEDGFYYDIDMPPLSEEAFPKIE
AEMKRIIKAKLPIERNEVSKADALDFYKDEPYKTEMISDLADGTISFYKQGDFTDLCRGP
HVPHTGFVRAVKLMRVSGAYWRADQSKAQLQRIYGTAFFDKKQLKAYLNFLEEAKKRNHR
KIGAAMDLFSFHDDAPGMPFFHPKGMDVWNALLDFWRDAHREAGYVETKTPIILQRTLWE
KSGHWENYRENMYTTEVDDQAYAIKPMNCPGGMLLYSTRPHSYRELPIRAAEIGLVHRHE
MSGVLNGLFRVRAFHQDDAHLFMMPDQIQGEILDLLRLEERVYAAFGLDFHLELSTRPDK
SIGTDEQWDTATNGLRSALDAYGKEYRINEGDGAFYGPKIDLHIKDALGRTWQCGTIQLD
MSLPERFDLTYVGKDNEKHRPIMLHRTVFGSIERFLGILIEHFEGKFPLWLAPVQAAILP
INDDLIPFADQVAKTMTDAGLRVEVDDRTESLNRKIREAQLAKTPLILTCGAKEKEAGTM
SVRTLDGTVRYGIPMDQFMEKVVAHVAQRRLELDLFDE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggtacatatcacacttcccgatggaagtcgaaaaccctttgaagattatcccaccgga
ctcgacgttgccaaaagtatttccgaaggactggccagagattgtgtggccatggtggtg
gatgaccacgtggtggacctgaaccggcccatcaaggccgatgccgccatccgcctgatt
accacgcgtgatcctgaagcccttgaaatcatgcgccacagcgccgcgcatgtcatggcc
caggcggttttgaaactttacccggatgccaaactgaccatcggaccggtggtggaggac
gggttttattatgatatcgacatgccgccgctttcggaagaggcgtttcccaagatcgaa
gccgaaatgaagcgtatcatcaaggccaaactgcccatcgagcgcaatgaggtgtccaag
gccgatgccctggatttttacaaggatgaaccctacaaaaccgagatgatcagcgacctg
gccgacggtacgatttctttttacaagcagggggattttactgatctgtgccggggaccg
catgtgccccacaccggttttgtgcgggccgtcaagctgatgcgcgtctccggtgcctac
tggcgggcggatcagtccaaggcccagctgcagcgtatctacggcaccgcttttttcgat
aagaagcagctcaaggcctatctgaatttcctcgaagaggccaaaaagcgcaaccaccgc
aaaatcggggcggccatggacctgttcagcttccatgacgacgcgcccggaatgccgttt
tttcatcccaagggcatggacgtgtggaatgcgctgttggacttctggcgtgatgcccac
cgcgaagccgggtacgtggagaccaagacgcccatcatccttcagcgcaccttgtgggag
aaaagtgggcactgggagaattatcgcgaaaatatgtacaccaccgaggtggatgaccag
gcctatgccatcaagcccatgaactgcccgggcggcatgctgctctacagcacccggccg
cactcgtatcgggaactgcccatccgcgccgcagagatcggtctggtgcaccgccacgag
atgtccggggtactcaacggcctgtttcgggtgcgggcctttcaccaggacgatgcccac
ctgttcatgatgcccgatcagattcagggggaaatccttgatctgttgcggctggaggag
cgggtgtacgctgccttcgggcttgatttccacctggagctttccacacggccggataaa
tcaatcggtacggacgagcagtgggatacggccaccaacggtctgcgatcagccctggat
gcctacggcaaggagtaccgcatcaacgaaggcgacggcgcgttttatggaccgaaaatc
gacctgcacatcaaagatgccctgggccgaacctggcagtgcgggaccatccagctggac
atgagcctgcccgaacggtttgacttgacttatgtgggcaaggacaacgaaaaacatcgg
ccgatcatgctgcatcgaacggtgttcgggtccatcgagcggtttctgggaattctcatc
gagcattttgaaggcaagtttcccttatggctggcgccggtacaggcggccatcctgccc
atcaacgatgatctgattccctttgccgatcaggtggccaagaccatgaccgatgccggg
ctgcgagtcgaggtggatgaccgcaccgaaagcctgaaccgcaaaatccgcgaagcccag
ctggccaagacaccgctgattctcacttgcggggccaaagaaaaagaggccggcaccatg
agcgtgcgcaccctggatggaactgttcgctacggcattcccatggatcagttcatggaa
aaggtggttgcccatgtggcccagcgtcgcctggaactggatctgtttgacgaataa
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