Desulfosarcina variabilis: Dvar_60100
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Entry
Dvar_60100 CDS
T10869
Name
(GenBank) RsmE: ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvr03009
]
Dvar_60100
Enzymes [BR:
dvr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
Dvar_60100
Ribosome biogenesis [BR:
dvr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dvar_60100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
XPS87992
LinkDB
All DBs
Position
6725508..6726323
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AA seq
271 aa
AA seq
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MTILSSFLRHPNIIAKRHPMALRRFYIAPEMIHQHQPEITGSDAKHISRVLRLKPDDAIE
LFDGTGQGYRARIICVSSEIVKLTIESSFAFLSESPVHITLAQAMLKDRKMDDLIRPLTE
LGIDCWMPFYASRSVPSPKGKGLHKRLARWEKIAVEAVKQCRRGHIPDILPVNDFNAVLA
ASATCDGRLLFWEDTNHAFAIPRQAVKRVMLILGPEGGFAPLEVQQAKDHGFLTAGLGPR
ILRAETATLAAITLVQYCMGDMGNALPRNQA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
ttgacgattttgtcgtcatttttaaggcaccctaacatcattgccaaaaggcatcccatg
gccttaagacgattttacatcgcaccggaaatgatccatcagcatcaaccggaaatcacc
ggatcggatgcgaagcatatatcgcgtgtgctgcgtctgaaaccggatgatgccatcgaa
cttttcgatggcaccggacagggctatcgcgcgcggatcatttgtgtatcctcggaaatc
gtgaagctgaccatcgaatcgtcatttgcgtttttatctgaatcgcctgttcacatcacc
ctggcccaggcgatgctcaaagatcgcaaaatggacgatctcatccggccgttgaccgag
cttggcatcgactgctggatgcccttttatgcgtcccgctcggtgccctccccgaaaggc
aaaggcttgcataaacgcttggcgcgatgggaaaaaattgccgttgaggcggttaagcag
tgtcgccgcggacacatcccggatattctaccggtaaatgattttaacgccgtgttagcg
gcatcggcgacctgtgatggccggcttctcttctgggaggacaccaaccacgcctttgcc
attccccggcaagccgttaaacgcgtcatgctgatcttggggccggaaggtggtttcgcc
cctctggaagttcagcaggcaaaagaccatggttttttgacggccggcttgggaccccgc
atcttacgagcggaaaccgccacgctggccgccatcaccctggtgcagtattgcatgggg
gatatgggcaatgccttaccccgtaatcaggcctga
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