Desulfosarcina variabilis: Dvar_60840
Help
Entry
Dvar_60840 CDS
T10869
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
dvr Desulfosarcina variabilis
Pathway
dvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dvar_60840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvr02000
]
Dvar_60840
Transporters [BR:
dvr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dvar_60840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_16
NB-ARC
AAA_22
AAA_25
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
XPS88066
LinkDB
All DBs
Position
complement(6802855..6803847)
Genome browser
AA seq
330 aa
AA seq
DB search
MGAELLKVDDLTVSFATDEGRFVAVDDVSLHVNRGEIVGLVGESGCGKSVCALSILRLIP
SPPGKITSGKIVFNGSDLLALDIKAMRRIRGRAISMIFQEPLSALSPLQRIGQQLAEVLQ
LHSNMDKQRAMQIGREWLAKVRIPDPEQRMQAYPHELSGGMQQRVMIAMALMQDPALVIA
DEPTTALDVTIQAQIFNLIKKMRKEKTSILLITHDMGVVWQMCDRVLVMYASTIVESGTK
AQIFEHPAHPYTRGLLQSIPTLFGSSKRLPAIAGYVPSPFNYPSGCHFRDRCPYAVDRCA
AEAPTLENIENGGHQAACFVARKLVEGRLE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgaactacttaaggttgacgacttgacggtcagttttgcaactgatgagggt
cggtttgtggcggttgatgatgtctccttgcatgtcaatcgcggtgaaattgtggggctg
gtgggcgaatcggggtgcgggaaatcggtttgtgccctgagcattttgcgcctgatccca
tcgccaccggggaaaattacctccggtaaaatcgtgttcaacggctctgacctcttggca
ctggacatcaaagcgatgcgccggatcagagggcgcgcgatcagtatgatttttcaggag
ccgttgtcggcattgtcgcccttgcagcgtatcggtcagcagttggccgaagtgttgcaa
ttgcacagcaatatggacaagcagcgggccatgcaaatcggccgggagtggctggccaag
gtgcgcatccccgatccggagcaacgcatgcaagcttatccgcacgagctttccgggggg
atgcagcagcgtgtgatgattgccatggccctgatgcaggatccggcgttggtgatcgcc
gatgaaccgacaacggcattggatgttaccattcaggctcagatctttaatttgatcaaa
aagatgcgaaaagagaagacctcgatcttgttgatcacccacgatatgggggtggtctgg
caaatgtgcgaccgggtgctggtgatgtatgcctcgactatagttgaatccggaaccaag
gcacaaattttcgagcatcccgcccatccctacacgcgcgggcttttgcaatcgatcccg
accctgtttggaagcagcaagcgtctgcccgccattgcggggtatgtgccatcgcctttt
aactatccaagcggctgccatttccgggatcgttgcccgtatgctgttgatcgatgtgca
gccgaagcgcccacacttgaaaacattgaaaatggcggccatcaggccgcttgtttcgtt
gcccgcaagctggttgagggccgtctggaataa
DBGET
integrated database retrieval system
