Desulfosarcina variabilis: Dvar_61180
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Entry
Dvar_61180 CDS
T10869
Name
(GenBank) DnaX: DNA polymerase III, subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr03030
DNA replication
dvr03430
Mismatch repair
dvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dvar_61180
03430 Mismatch repair
Dvar_61180
03440 Homologous recombination
Dvar_61180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvr03032
]
Dvar_61180
03400 DNA repair and recombination proteins [BR:
dvr03400
]
Dvar_61180
Enzymes [BR:
dvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dvar_61180
DNA replication proteins [BR:
dvr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dvar_61180
DNA repair and recombination proteins [BR:
dvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dvar_61180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_5
TIP49
AAA_30
PIF1
AAA_22
AAA_19
DNA_pol3_delta_C
AAA_16
nSTAND3
Rad17
AAA_18
TsaE
Mg_chelatase
AAA_7
Sigma54_activat
AAA_14
AAA_28
RCF1-5-like_lid
Zeta_toxin
RNA_helicase
DUF815
ABC_tran
ORC-CDC6-like
DnaX_C
nSTAND_NTPase5
AAA_2
T2SSE
Torsin
SKI
Motif
Other DBs
NCBI-ProteinID:
XPS88100
LinkDB
All DBs
Position
complement(6835878..6837572)
Genome browser
AA seq
564 aa
AA seq
DB search
MSYLVLARKYRPQTFDQVVGQTHVTQTLTNAIQSQRVAHAILFSGPRGTGKTTIARILAK
AMNCEKGPTATPCNACRSCLDITAGRGVDVFEIDGASNNSVDQVRELRDNSRYMPAHSRY
KIYIIDEVHMLSIAAFNALLKTLEEPPDHVMFLFATTEVHKIPITILSRCQRHDLRRIAL
SAIVEQMETICRQESFTLSAGNLWAVARESGGSMRDALSLLDQILACSDGGLGDDDVLNL
LGTMDRKILFDLSEAVFARDIARILDIVDTVFKTGQDMKRFYADLLMHFRYLMLIKMGAR
SETLADLSPNDLETLGEQAKGVSLAFMDQIFTLLFNAEQRVRSASQPRLAVEMVFFKIHQ
ITPALPIDVLIERMDSLLSHPALQAPVSNSTIVEAQSAYGQAPVTPAAPAPLASNAEASV
VDAPVVGQDQADAKKADGTANAVETHDPWKQVIDQIGKAKPSIAAALSRAQLRSVSPEKF
VVAIQDNEYTLKLIKKNLDWVEAICRQHADRDIKIDFADDKKDDAQVATAKSKANELRQQ
LLNHPLVADAVDIFSGKIEDIKIK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatctagtattggcaagaaaataccggccgcagacctttgaccaggtggtcggg
cagacgcacgttacacagacgttgaccaacgccatccagagtcagcgggtggcccatgct
attttattctccgggccacggggaaccggcaaaaccacgattgcacgaatcctggccaaa
gccatgaactgcgagaaagggcccaccgccacgccatgcaatgcctgtcgttcctgtttg
gacatcacggccgggcggggtgtggatgtcttcgagattgacggtgcctcaaacaacagc
gtcgatcaggttcgtgaactgagggataacagccggtatatgccggcccacagccgctat
aaaatatacattattgacgaagtgcatatgctcagcatcgcggctttcaacgcgctgcta
aaaaccctcgaggaaccgccggatcatgtgatgtttttgttcgccaccaccgaggttcat
aaaattcccatcaccattttgtcccgttgtcagcggcatgatttgcggcgtattgccttg
tcggccattgtcgagcagatggaaacgatttgccggcaggagtcgtttaccctatcggcg
gggaacctatgggcggttgctcgcgaatccggcggtagcatgcgtgatgccttgagtttg
cttgatcagatactggcctgcagtgatggcggactgggcgatgacgatgtgttgaacctg
ttggggaccatggatcgcaagatccttttcgatttgtctgaggcggtgtttgccagggat
attgcccgtatcctggacattgtcgatacggtttttaaaaccggtcaggacatgaaacgg
ttttacgccgacctgttgatgcattttcgttatttgatgctgatcaaaatgggggcccgc
tctgaaacgctggcggatctgtcgcccaacgatctggagacgctgggtgagcaggcaaaa
ggtgtttccctggcgtttatggatcagatcttcaccctgctgttcaatgccgaacagcgc
gtccggtcggccagccagccccgcttggccgttgagatggtttttttcaagattcaccag
atcacaccggcactgccgattgatgtgttgatcgaacgcatggacagccttttaagccat
cccgctttgcaggcgccggtatcaaactcaaccattgtcgaggcgcaatctgcctatggg
caggcgccagtcacaccagcggcgccggctcctttggccagtaatgctgaggcatcggtg
gtcgatgccccggtcgtcggccaggaccaagcggatgctaaaaaagcagatggaaccgca
aacgcggttgaaacgcatgacccctggaagcaggtgattgatcagattgggaaggccaag
ccatccattgccgccgcgttgtcccgagcgcaattgcggtctgtgtcaccggaaaaattt
gttgtcgccatacaggacaatgaatacacgttgaagctgataaaaaagaatctcgattgg
gttgaagcgatttgccgccaacatgcggaccgcgacattaaaattgactttgccgacgat
aaaaaggacgacgcccaggtggcaacagcaaaatcaaaggccaacgaacttcgacagcaa
ttgctaaaccatcccctggtggcggatgccgtggatatttttagtggaaaaattgaagat
attaaaatcaaatag
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